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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ldyB_

Fold library idPDB HeaderMoleculeTitle
c5ldyB_2.60PDB header: cell adhesionChain: B: PDB Molecule: ig domain protein group 1 domain protein;


Added to library: Sat Jun 17 08:31:10 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRGNLSTTNSTLVAAPVNIEANSSDTSVVTLTLRDNNNNPVTGQTVVFTSTLGTLGNVTEQASGLYTATL
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Known secondary structure (DSSP)





TTT


SS
SSS



B
TT

B

S

SSS



SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TAGTVSGVASLSVSVGGNALGVTGNITLAPGALDAARSILAVNKPSINADDRIGSTITFTAQDAQGNAIT
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Known secondary structure (DSSP)

S

TT
S



SB
GGG
S
STT
SS

BBTTS
B

 .........150.........160.........170.........180.........190.........200.........210
Sequence GLDIAFMTDLENSQIMTLVDHNDGTYTANINGTQTGIANIAVQSSGATIAGLAATMVTITPGAWNTTQAT
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Known secondary structure (DSSP) S




STT



SSSSS
TT

S





SB
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PVMTVALPITTCQSSSGVYKRYYIGIVTHELYDNYGNEISGILTYNLGAGRYTTVTSQNSSVSGSNGLTR
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Known secondary structure (DSSP)
S

SS



SSSSB



BTTS




TT



 .........290.........300.........310.........320.........330.........
Sequence RSNSPVSHFILTSDAYTSQAACYAERIANVNVTITVTAITDDFKTSAVNKVFILGTGSN
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Known secondary structure (DSSP) SS
TT

BSST

SS
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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