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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ldxp_

Fold library idPDB HeaderMoleculeTitle
c5ldxp_5.60PDB header: oxidoreductaseChain: P: PDB Molecule: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit


Added to library: Thu Feb 9 12:11:45 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

S



S








S

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SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence XXCQEKDVLCMFEAEMQWRRDYKVDQEIVNIIQERLKACQQREGESHRQNCAKELEQFTQVVKAYQDRYX
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Known secondary structure (DSSP) TT

SS
SSSTTSS

S
 .........150.........160.........
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) SSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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