PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5l9uA_

Fold library id	PDB Header	Molecule	Title
c5l9uA_	6.40	PDB header: signaling protein	Chain: A: PDB Molecule: anaphase-promoting complex subunit 1;

Links to external resources
Added to library: Fri Feb 10 00:19:28 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M I A A R D L Q E F V P F G R D H C K H H P E S W Q L R K G V S E I G E D V D Y D E E L Y V A G N M V I W S K A V Y K A F T V D S P V Q Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
S S
B
S S S
T T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L W C D F I I E V E K C I C I L Q S S C I N M H S I E G K D Y I A S L P F Q V A N V W P T K Y G L L F E R S P L P T M F S M L H P L D E I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T T S
S S
S
T T
S S
S S T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P L V C K V Q Y V V D H A M K I V F L N T D P S I V M T Y D A V Q N V H S V W T L R R V K S V P E L C I D H L W T N S Q A S K V F I T S D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S B
S S
S S S
T T T T B
S S S S S S
B
S
S B
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence C G Q K F L C F L V E S Q L Q L R C V K F Q E S T Q L I F G S V T N I P A K D A A P V E K I D T M L V L E G S G N L V L Y T G V V R V G K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T S S S
S
S S S S
T T T S S S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence F I P G T Y I H S I R D P V H N R V T L E L S N G S M V R I T I P E I A T S E L V Q T C L Q A I K F I L P K E I A V Q M L V K W Y N V H S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T S
S
S S
S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence Y H S E W N L F V T C L M N M M G Y D D D W E Y L L N S D Y H Q N V E S H L T H I P A I F F V L H L V Y E E L K L N T L M G E G I C S L V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S
S S S S
S S T S T T
T T T T T S S S T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L L V Q L A R D L K L G P Y V D H Y Y R D Y P T L S E P P S I Y Q W V S S C L K G E G M P P Y P Y L P G I C E R S R L V V L S I A L Y I L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S T S T T
S S
S
S
T T T T T S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence S L A E R L V V W M T N V G F T L R D L E T L P F G I A L P I R D A I Y H C R E Q P A S D W P E A V C L L I G R Q D L S K Q D D G M N D M N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T G G G G S
S
S
T T
S
S S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence H E V M S L I W S E D L R V Q D V R R L L Q S A H P V R V N V V Q Y P E L S D H E F I E E K E N R L L Q L C Q R T M A L P V G R G M F T L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
S S
S S
T T S
T T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence S Y H P V P T E P L P I P K L N L T G R A P P R N T T V D L N S G N I D V P P N M T S W A S F H N G V A A G L K I A P A S Q I D S A W I V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S
S S S
T T S S S S
S S
T T T T B
T T S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence N K P K H A E L A N E Y A G F L M A L G L N G H L T K L A T L N I H D Y L T K G H E M T S I G L L L G V S A A K L G T M D M S I T R L L S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T T T G G G G S
T S
S S S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence H I P A L L P P T S T E L D V P H N V Q V A A V V G I G L V Y Q G T A H R H T A E V L L A E I G R P P G P E M E Y C T D R E S Y S L A A G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T S
S S
T S T T
S S
S S S S S
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence A L G M V C L G H G S N L I G M S D L N V P E Q L Y Q Y M V G G H S P S Y Q I K E G D T I N V D V T C P G A T L A L A M I Y L K T N N R S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S G G G S
S S
S S
T T
T T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence A D W L R A P D T M Y L L D F V K P E F L L L R T L A R C L I L W D D I L P N S K W V D S N V P Q I I R E N L N L E T L S Q A H V Y I I A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S T T S
S T T T
S S T S
S
S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence A C L S L G F R F A G S E N L S A F N C L H K F A K D F M T Y L S A P N A S V T G P H N L E T C L S V V L L S L A M V M A G S G N L K V L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
T S T T T T T T
T T
S S
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L C R F L H M K T G G E M N Y G F H L A H H M A L G L L F L G G G R Y S L S T S N S S I A A L L C A L Y P H F P A H S T D N R Y H L Q A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
T G G G G T
T S
S
S S T T
T T S
G G G G

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence H L Y V L A A E P R L L V P V D V D T N T P C Y A L L E V T Y K G T Q W Y E Q T K E E L M A P T L L P E L H L L K Q I K V K G P R Y W E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T T
B T T T
S B
S S S S
S S B
S
S S S
S T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence I D L T Q H L K S I L S K D G V L Y V K L R A S F A E Y F C K F S S V L Y E C V T Q E T P E M L P A Y I A M D Q A I R R L G R R E M S E T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T T
S S S
S
S S S
S T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence E L W Q I K L V L E F F S S R S H Q F M N S E F L P V V K C T I D N T L D Q W L Q V G G D M C V H A Y L S L E E S Q L S M L A C F L V Y H S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
S T T T S S
S S S

. . . . . . . . . 1340 . .

Sequence V P S T S F A E L L F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	A	A	R	D	L	Q	E	F	V	P	F	G	R	D	H	C	K	H	H	P	E	S	W	Q	L	R	K	G	V	S	E	I	G	E	D	V	D	Y	D	E	E	L	Y	V	A	G	N	M	V	I	W	S	K	A	V	Y	K	A	F	T	V	D	S	P	V	Q	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S							B					S	S								B					S	S	S						T	T	T							S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	W	C	D	F	I	I	E	V	E	K	C	I	C	I	L	Q	S	S	C	I	N	M	H	S	I	E	G	K	D	Y	I	A	S	L	P	F	Q	V	A	N	V	W	P	T	K	Y	G	L	L	F	E	R	S	P	L	P	T	M	F	S	M	L	H	P	L	D	E	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T									T	T							T	T	S								S	S			S						T	T								S	S							S	S	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	V	C	K	V	Q	Y	V	V	D	H	A	M	K	I	V	F	L	N	T	D	P	S	I	V	M	T	Y	D	A	V	Q	N	V	H	S	V	W	T	L	R	R	V	K	S	V	P	E	L	C	I	D	H	L	W	T	N	S	Q	A	S	K	V	F	I	T	S	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S	S	S	B				S	S								S	S	S								T	T	T	T							B				S	S	S	S	S	S		B							S			S	B							T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	G	Q	K	F	L	C	F	L	V	E	S	Q	L	Q	L	R	C	V	K	F	Q	E	S	T	Q	L	I	F	G	S	V	T	N	I	P	A	K	D	A	A	P	V	E	K	I	D	T	M	L	V	L	E	G	S	G	N	L	V	L	Y	T	G	V	V	R	V	G	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T	T	T	T										S	S	S												S						S	S	S	S							T	T	T						S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	I	P	G	T	Y	I	H	S	I	R	D	P	V	H	N	R	V	T	L	E	L	S	N	G	S	M	V	R	I	T	I	P	E	I	A	T	S	E	L	V	Q	T	C	L	Q	A	I	K	F	I	L	P	K	E	I	A	V	Q	M	L	V	K	W	Y	N	V	H	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												T	T							T	T	S										S			S														S																S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	H	S	E	W	N	L	F	V	T	C	L	M	N	M	M	G	Y	D	D	D	W	E	Y	L	L	N	S	D	Y	H	Q	N	V	E	S	H	L	T	H	I	P	A	I	F	F	V	L	H	L	V	Y	E	E	L	K	L	N	T	L	M	G	E	G	I	C	S	L	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S											T	T	S						S	S						S							S							S	S														T	S	T	T		T	T	T	T	T	S	S	S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	L	V	Q	L	A	R	D	L	K	L	G	P	Y	V	D	H	Y	Y	R	D	Y	P	T	L	S	E	P	P	S	I	Y	Q	W	V	S	S	C	L	K	G	E	G	M	P	P	Y	P	Y	L	P	G	I	C	E	R	S	R	L	V	V	L	S	I	A	L	Y	I	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T	T			S		S					T	S	T	T				S	S													S			S							T	T	T	T														T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	L	A	E	R	L	V	V	W	M	T	N	V	G	F	T	L	R	D	L	E	T	L	P	F	G	I	A	L	P	I	R	D	A	I	Y	H	C	R	E	Q	P	A	S	D	W	P	E	A	V	C	L	L	I	G	R	Q	D	L	S	K	Q	D	D	G	M	N	D	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S			T	T	G	G	G	G	S																		S			S										T	T				S						S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	H	E	V	M	S	L	I	W	S	E	D	L	R	V	Q	D	V	R	R	L	L	Q	S	A	H	P	V	R	V	N	V	V	Q	Y	P	E	L	S	D	H	E	F	I	E	E	K	E	N	R	L	L	Q	L	C	Q	R	T	M	A	L	P	V	G	R	G	M	F	T	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T					S		S	S													S	S										T	T	S																															T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	Y	H	P	V	P	T	E	P	L	P	I	P	K	L	N	L	T	G	R	A	P	P	R	N	T	T	V	D	L	N	S	G	N	I	D	V	P	P	N	M	T	S	W	A	S	F	H	N	G	V	A	A	G	L	K	I	A	P	A	S	Q	I	D	S	A	W	I	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				S	S	S														S	S	S						T	T	S	S	S	S				S	S		T	T	T												T	B		T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	K	P	K	H	A	E	L	A	N	E	Y	A	G	F	L	M	A	L	G	L	N	G	H	L	T	K	L	A	T	L	N	I	H	D	Y	L	T	K	G	H	E	M	T	S	I	G	L	L	L	G	V	S	A	A	K	L	G	T	M	D	M	S	I	T	R	L	L	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S	S	T	T															T	G	G	G	G	S										T	S																	S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	H	I	P	A	L	L	P	P	T	S	T	E	L	D	V	P	H	N	V	Q	V	A	A	V	V	G	I	G	L	V	Y	Q	G	T	A	H	R	H	T	A	E	V	L	L	A	E	I	G	R	P	P	G	P	E	M	E	Y	C	T	D	R	E	S	Y	S	L	A	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	T	S		S	S																						T	S	T	T			S											S					S	S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	A	L	G	M	V	C	L	G	H	G	S	N	L	I	G	M	S	D	L	N	V	P	E	Q	L	Y	Q	Y	M	V	G	G	H	S	P	S	Y	Q	I	K	E	G	D	T	I	N	V	D	V	T	C	P	G	A	T	L	A	L	A	M	I	Y	L	K	T	N	N	R	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S			S	S	G	G	G	S		S									S							S	S					T	T																		T	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	A	D	W	L	R	A	P	D	T	M	Y	L	L	D	F	V	K	P	E	F	L	L	L	R	T	L	A	R	C	L	I	L	W	D	D	I	L	P	N	S	K	W	V	D	S	N	V	P	Q	I	I	R	E	N	L	N	L	E	T	L	S	Q	A	H	V	Y	I	I	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				S	T	T					S																S	T	T	T				S	S						T	S						S			S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	A	C	L	S	L	G	F	R	F	A	G	S	E	N	L	S	A	F	N	C	L	H	K	F	A	K	D	F	M	T	Y	L	S	A	P	N	A	S	V	T	G	P	H	N	L	E	T	C	L	S	V	V	L	L	S	L	A	M	V	M	A	G	S	G	N	L	K	V	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	S	S																					T	S	T	T	T	T	T	T																			T	T		S	S			S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	C	R	F	L	H	M	K	T	G	G	E	M	N	Y	G	F	H	L	A	H	H	M	A	L	G	L	L	F	L	G	G	G	R	Y	S	L	S	T	S	N	S	S	I	A	A	L	L	C	A	L	Y	P	H	F	P	A	H	S	T	D	N	R	Y	H	L	Q	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T			S	S	S																	T	G	G	G	G	T							T										S		S				S	S	T	T			T	T	S		G	G	G	G
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	H	L	Y	V	L	A	A	E	P	R	L	L	V	P	V	D	V	D	T	N	T	P	C	Y	A	L	L	E	V	T	Y	K	G	T	Q	W	Y	E	Q	T	K	E	E	L	M	A	P	T	L	L	P	E	L	H	L	L	K	Q	I	K	V	K	G	P	R	Y	W	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	T	T						B					T	T	T		S	B												S	S	S	S									S	S	B			S		S	S	S								S	T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	I	D	L	T	Q	H	L	K	S	I	L	S	K	D	G	V	L	Y	V	K	L	R	A	S	F	A	E	Y	F	C	K	F	S	S	V	L	Y	E	C	V	T	Q	E	T	P	E	M	L	P	A	Y	I	A	M	D	Q	A	I	R	R	L	G	R	R	E	M	S	E	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S								T	T	T												S	S	S		S			S								S	S		S	T																	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	E	L	W	Q	I	K	L	V	L	E	F	F	S	S	R	S	H	Q	F	M	N	S	E	F	L	P	V	V	K	C	T	I	D	N	T	L	D	Q	W	L	Q	V	G	G	D	M	C	V	H	A	Y	L	S	L	E	E	S	Q	L	S	M	L	A	C	F	L	V	Y	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S	S	S						S	T																				T	T								S	S			S	S	S
	.	.	.	.	.	.	.	.	.	1340	.	.
Sequence	V	P	S	T	S	F	A	E	L	L	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	S