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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5l9sA_

Fold library idPDB HeaderMoleculeTitle
c5l9sA_2.49PDB header: transport proteinChain: A: PDB Molecule: abc transporter, substrate binding protein (mannopine);


Added to library: Thu Feb 9 18:03:57 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEQRVVIATTGGTYEKALREAWFEPFTKATGIKVVTVSGTDAEKRAKVTAMVQTGNVTWDLYLDGEIQAG
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Known secondary structure (DSSP)




T



SS



STTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence SDAHFAITEDLSDFCMQFINSTDLLADSCTRGGAKLQSTSTLLAYKLNENGSNPQTWADMWDLAKFPGAR
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Known secondary structure (DSSP) SB


GGG
S
S
B
TTSTT

TTS



ST
TTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SFPNFDDPWRVLAAALLADGVPREKLFPLDVDRAFRKLDELRDSVQVWWRTGDQSVQAFRNDEYRVGQIW
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Known secondary structure (DSSP)
SS

TT

GGG

S

TTTSSTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LTRAKALKAEGYKIGWSYDGAFLVGDRIALVRGAPNRENALKLIEFWLRNPAAQAKACETLSCTPPSQKA
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Known secondary structure (DSSP) TT

BTT
TTT
T
B
SB
 .........290.........300.........310.........320......
Sequence ISQMSSEARATLPSAADVENRIIVPDAQWINANMGMLVQRWNSWIR
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Known secondary structure (DSSP) S
TTS

T
B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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