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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5l9mA_

Fold library idPDB HeaderMoleculeTitle
c5l9mA_1.93PDB header: transport proteinChain: A: PDB Molecule: deoxyfructosyl-amino acid transporter periplasmic binding


Added to library: Thu Feb 9 13:44:17 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DNPLGLIDPTTISVGTMGDAKPYAFTTADGNFTGFDIELFLNVAGRLGFKKEQVVFTGQEFSALMPSVAN
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Known secondary structure (DSSP)

TT

SBTTB
STTT
TTS
STT

GGG

GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GRFDVAAAAIGTTAKRKETVDFSDGYLAGFLSVLTSTDAAGLKGKRLGVVQGTLQEIYAEKNFAGTDLVK
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Known secondary structure (DSSP) TS
S
S

B

TTGGGT



B




SGGGTTSTTS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FPDNNSAVSALNNGTVDAHFLDFEAAKDYSARYPALKIAVNIPSFDAPAGFVIRKGNDALRNALDKGLKE
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Known secondary structure (DSSP) SSTS
SSTT

TTS
B

TT
 .........220.........230.......
Sequence AMQDGTWKKLHEKWFPGTPMPAAYLPK
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Known secondary structure (DSSP) TTSTT



GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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