Fold library entry viewer: c5l5mA_

Added to library: Sat Jul 9 08:40:55 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	S	F	V	T	F	R	G	E	P	A	E	G	F	N	H	L	V	V	D	E	R	T	G	H	I	Y	L	G	A	V	N	R	I	Y	K	L	S	S	D	L	K	V	L	V	T	H	Q	T	G	P	D	E	D	N	P	K	C	Y	P	P	R	I	V	Q	T	C	N	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	T	T									T	T	T								T	T							T	T																T	T		S	S	T	T	T	T	S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	S	T	N	N	V	N	K	M	L	L	I	D	Y	K	E	N	R	L	I	A	C	G	S	L	Y	Q	G	I	C	K	L	L	R	L	E	D	L	F	K	L	G	E	P	F	H	K	K	E	H	Y	L	S	G	V	N	E	S	G	S	V	F	G	V	I	V	S	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T							S	S	S	S	S	B						T	T	T									S	S	S	T	T	B							S	S	S									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	F	D	D	K	L	F	I	A	T	A	V	D	G	K	P	E	Y	F	P	T	I	S	S	R	K	L	T	K	N	S	E	A	D	G	M	F	A	Y	V	F	H	D	E	F	V	A	S	M	I	K	I	P	S	D	T	F	T	V	I	P	D	F	D	I	Y	Y	V	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S										T	T		T	T	T			S								S		S	S		T	T	T	T		B	S	S	B		S	S		B	S												S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	S	S	G	N	F	V	Y	F	L	T	L	Q	P	E	M	V	S	P	P	G	S	T	T	K	E	Q	V	Y	T	S	K	L	V	R	L	C	K	E	D	T	A	F	N	S	Y	V	E	V	P	I	G	C	E	R	N	G	V	E	Y	R	L	L	Q	A	A	Y	L	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											S	S	S	S			S	S															T	T		T	T		T	T											T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	G	A	V	L	G	R	T	L	G	V	R	P	D	D	D	L	L	F	T	V	F	S	K	G	Q	K	R	K	M	K	S	L	D	E	S	A	L	C	I	F	I	L	K	Q	I	N	D	R	I	K	D	R	L	Q	S	C	Y	R	G	E	G	T	L	D	L	A	W	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			T	T											B	S			S	S	S			S																								T	T	T		S	B				T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	K	D	I	P	C	S	S	A	L	L	T	I	D	D	N	F	C	G	L	D	M	N	A	P	L	G	V	S	E	M	V	R	G	I	P	V	F	T	E	D	R	D	R	M	T	S	V	I	A	Y	V	Y	K	N	H	S	L	A	F	V	G	T	K	S	G	K	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			B										T	T					S	T	T		S				S	S											S	S	S											T	T									T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	R	V	D	G	P	K	G	N	A	L	Q	Y	E	T	V	Q	V	V	D	S	G	P	V	L	R	D	M	A	F	S	K	D	H	E	Q	L	Y	I	M	S	E	R	Q	L	T	R	V	P	V	E	S	C	G	Q	Y	R	S	C	G	E	C	L	G	S	G	D	P	H	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T										S		S	S	S										S	S	S	S							S	S							S			G	G	G			S										T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	W	C	V	L	H	N	T	C	T	R	K	E	R	C	E	R	S	R	E	P	R	R	F	A	S	E	M	K	Q	C	V	R	L	T	V	H	P	N	N	I	S	V	S	Q	Y	N	V	L	L	V	L	E	T	Y	N	V	P	E	L	S	A	G	V	N	C	T	F	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T					T	T	T	S	T	T	T	T	S	T	T	S				S	G	G	G	S						S	S					T	T			S									S					T	T								T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	S	E	M	D	G	L	V	I	G	N	Q	I	Q	C	Y	S	P	A	A	K	E	V	P	R	I	I	T	E	N	G	D	H	H	V	V	Q	L	Q	L	K	S	K	E	T	G	M	T	F	A	S	T	S	F	V	F	Y	N	C	S	V	H	N	S	C	L	S	C	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T									T	T	T						T	T	T	T	T											T	T	T		S													T	T			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	P	Y	R	C	H	W	C	K	Y	R	H	V	C	T	H	D	P	N	T	C	S	F	Q	E	G	R	V	K	L	P	E	D	C	P	Q	L	L	R	V	D	K	I	L	V	P	V	E	V	I	K	P	I	T	L	K	A	K	N	L	P	Q	P	Q	S	G	Q	R	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S						T	T	T	T				S		S	T	T	S	S	S	G	G	G				S	S	T	T	S							S						B	T																	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	C	I	L	N	I	Q	G	I	E	Q	R	V	P	A	L	R	F	N	S	S	S	V	Q	C	Q	N	T	S	Y	S	Y	E	G	M	E	I	N	N	L	P	V	E	L	T	V	V	W	N	G	H	F	N	I	D	N	P	A	Q	N	K	V	Y	L	Y	K	C	G	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S												T	T									B			S					S											T	T	T				B		S	S									S		S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	E	S	C	G	L	C	L	K	A	D	P	D	F	E	C	G	W	C	Q	S	P	G	Q	C	T	L	R	Q	H	C	P	A	H	E	S	R	W	L	E	L	S	G	A	N	S	K	C	T	N	P	R	I	T	E	I	I	P	V	T	G	P	R	E	G	G	T	K	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							S		S	S	S						T	T	T	T					T	T	T	S			S	S	S			B			S	S	S															S				T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	R	G	E	N	L	G	L	E	F	R	D	I	A	S	H	V	K	V	A	G	V	E	C	S	P	L	V	D	G	Y	I	P	A	E	Q	I	V	C	E	M	G	E	A	K	P	S	Q	H	A	G	F	V	E	I	C	V	A	V	C	R	P	E	F	M	A	R	S	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S			S	S					T	T	T				T	T							T	T	T		B	T	T	T											S	T	T	S								S	S	S			S	S	S					S	S
	.	.	.	.	.
Sequence	L	Y	Y	F	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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