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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5l5kA_

Fold library idPDB HeaderMoleculeTitle
c5l5kA_7.50PDB header: signaling proteinChain: A: PDB Molecule: plexin-a4;


Added to library: Sat Jul 9 09:15:01 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSFVTFRGEPAEGFNHLVVDERTGHIYLGAVNRIYKLSSDLKVLVTHQTGPDEDNPKCYPPRIVQTCNEP
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Known secondary structure (DSSP)



SSTT



TTT

TT
TT





TT
SSTTTTS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LASTNNVNKMLLIDYKENRLIACGSLYQGICKLLRLEDLFKLGEPFHKKEHYLSGVNESGSVFGVIVSYS
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Known secondary structure (DSSP)







TTTT
SSSSSBTTT




SSSTTB





SSS



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NFDDKLFIATAVDGKPEYFPTISSRKLTKNSEADGMFAYVFHDEFVASMIKIPSDTFTVIPDFDIYYVYG
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Known secondary structure (DSSP) TTS




TT
TTT

S


S
SS
TTTT
BSSB
SS
BS


STT


 .........220.........230.........240.........250.........260.........270.........280
Sequence FSSGNFVYFLTLQPEMVSPPGSTTKEQVYTSKLVRLCKEDTAFNSYVEVPIGCERNGVEYRLLQAAYLSK
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Known secondary structure (DSSP) TT

SSSS

SS





TT
TT
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AGAVLGRTLGVRPDDDLLFTVFSKGQKRKMKSLDESALCIFILKQINDRIKDRLQSCYRGEGTLDLAWLK
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Known secondary structure (DSSP)
T

TT

BS

SSS

S
TTT
SB


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKDIPCSSALLTIDDNFCGLDMNAPLGVSEMVRGIPVFTEDRDRMTSVIAYVYKNHSLAFVGTKSGKLKK
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Known secondary structure (DSSP) SS

B








TT



STT
S


SS

SSS
TTTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IRVDGPKGNALQYETVQVVDSGPVLRDMAFSKDHEQLYIMSERQLTRVPVESCGQYRSCGECLGSGDPHC
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Known secondary structure (DSSP)

TTTT



S
SSS

SSSSSS


GGG

S

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence GWCVLHNTCTRKERCERSREPRRFASEMKQCVRLTVHPNNISVSQYNVLLVLETYNVPELSAGVNCTFED
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Known secondary structure (DSSP) GGGT
TTTSTTTTSTTS
SGGGS
SS
TT

S
S



TT
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence LSEMDGLVIGNQIQCYSPAAKEVPRIITENGDHHVVQLQLKSKETGMTFASTSFVFYNCSVHNSCLSCVE
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Known secondary structure (DSSP) T
TT


TTTTTTTT
TTT
S
STT

S
 .........640.........650.........660.........670.........680.........690.........700
Sequence SPYRCHWCKYRHVCTHDPNTCSFQEGRVKLPEDCPQLLRVDKILVPVEVIKPITLKAKNLPQPQSGQRGY
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Known secondary structure (DSSP) SSS

TTTTS
STTSSSGGG
SSTTS


S
BT







TT


 .........710.........720.........730.........740.........750.........760.........770
Sequence ECILNIQGIEQRVPALRFNSSSVQCQNTSYSYEGMEINNLPVELTVVWNGHFNIDNPAQNKVYLYKCGAM
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Known secondary structure (DSSP)
SS

TT
B

S



STTT
B
SS


SSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence RESCGLCLKADPDFECGWCQSPGQCTLRQHCPAHESRWLELSGANSKCTNPRITEIIPVTGPREGGTKVT
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Known secondary structure (DSSP)

SS
SSS


TTTT

TTTS

SSS

B

SSS








STT


 .........850.........860.........870.........880.........890.........900.........910
Sequence IRGENLGLEFRDIASHVKVAGVECSPLVDGYIPAEQIVCEMGEAKPSQHAGFVEICVAVCRPEFMARSSQ
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Known secondary structure (DSSP) SS

SSTTT
TT
TTT
BTTT



STTS
SSS

SSS
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence LYYFMTLTLADLKPNRGPMSGGTQVTITGTNLNAGSNVVVMFGSQPCLFHRRSPSYIICNTTSSEEVLDM
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Known secondary structure (DSSP)


S
STT


STT
SS

TT

SS




S
S

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KVTVQVDRARIRQDLVFQYVEDPTIVRIEPEWSIVSGNTPIAVWGTHLDLIQNPQIRAKHGGKEHINICE
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Known secondary structure (DSSP) TT



SSSTT


SGGG
SS
TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence VLNATEMTCQAPALALGPDHQSDLTERPEEFGFILDNVQSLLILNKTNFTYYPNPVFEATPIILKGKNLI
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Known secondary structure (DSSP)
SSS





SS



SS
B

SBTTBGGGTS
SS












S
SS
 .........1130.........1140.........1150.........1160........
Sequence PPVAGGNVKLNYTVLVGEKPCTVTVSDVQLLCESPNKVMARVGGMEYS
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Known secondary structure (DSSP)


SSTT




SS
B



SS





TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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