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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5l3xB_

Fold library idPDB HeaderMoleculeTitle
c5l3xB_2.75PDB header: transcriptionChain: B: PDB Molecule: negative elongation factor c/d;


Added to library: Sat Jun 25 08:15:23 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGG
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Known secondary structure (DSSP)





TTTTTTSTT
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SAVRRIAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPADITVLFKMFTSMDPPPV
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Known secondary structure (DSSP) TT


TGGGGSTS

TTSSS


G
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELIRVPAFLDLFMQSLFKPGARINQDHKHKYIHILAYAASVVETWKKNKRVSINKDELKSTSKAVETVHN
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Known secondary structure (DSSP) GGT

SSSS



TTT
SSS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LCCNENASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQPVHLALLDEISTCHQLLHPQVLQ
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Known secondary structure (DSSP)



STTTTTSSSS
TT



GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLVKLFETEHSALDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKDTDISLIRYFVTEVLDVIA
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Known secondary structure (DSSP) S


SSS
TTT




TT

 .........360.........370.........380.........
Sequence PPYTSDFVQLFLPILENDSIADPVTEFIAHCKSNFIMVN
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Known secondary structure (DSSP) S


SSS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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