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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5l2bC_

Fold library idPDB HeaderMoleculeTitle
c5l2bC_3.80PDB header: transport proteinChain: C: PDB Molecule: nucleoside permease;


Added to library: Sat Apr 15 08:51:33 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVLHSLLGMAVLIAIAVLLSTDRKAINIRTVAGAFLIQVALGALVLYVPQGRDMLGEASKTISNVIAYGN
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Known secondary structure (DSSP)
T
S
STT

T
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NGVDFLFGGLVSEKMFEVFGGGGFVFALRVLPMIVFFSSLMAVLYYIGVMQLLIKVIGGFLQKMLGTSKA
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Known secondary structure (DSSP) TGGGGSTTGGGG

TTTTTS


ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence ESMSAAASIFVGQTEAPLVVRPYIRRMTESELFAVMSGGLASVAGSVLAGYVQMGVPLPYLIAASFMAAP
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Known secondary structure (DSSP) TTTTS
TTSSTTTTTT




TTTT

TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGLLFAKLLVPETERTQEKPTNVIDAAASGAVTGAQIAIAVGASLLAFVALIAMINGIIGGVGGWFGHGD
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Known secondary structure (DSSP) S

SS






SSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence LTLQAILGWLFSPLAWVIGVPWSEAGIAGSLIGQKVVINAFVAYSEFVKYLKPEAAVQLSDTTKAIISFA
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Known secondary structure (DSSP)

S
TTTTT
STTTSSTT
TT


 .........360.........370.........380.........390.........400.....
Sequence LCGFANLGSIAVLVGGLSIMAPKRRKDVARLGIKAVVAGSLSNLMSAVIAGLFTG
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Known secondary structure (DSSP)



STTT
TTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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