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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5l22B_

Fold library idPDB HeaderMoleculeTitle
c5l22B_3.15PDB header: protein transportChain: B: PDB Molecule: abc transporter (hlyb subfamily);


Added to library: Tue Mar 14 13:25:57 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VLRSYLAKYKKTLIIVGLFSLFINILFLLPSIYMLAVYDIVVPSTSVPTLLVITALAVVLYFALGLLQSV
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Known secondary structure (DSSP)
T
TTTTTT
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RAKVMQIISLKLDSELNKEVFTSSFEYAIRNPSKASAQPINDLYQLKQFLTSPVLFAIFDLPWVPIYFGV
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Known secondary structure (DSSP)
SSS

SSTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFVFHVYYGVMAILSMAVIVALAILNEYITKKKLKESNELLVRSTNFLNRALLNAEVVEALGMRNNLYKK
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Known secondary structure (DSSP)
TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence WMNFYSKHLSAFEEATDRNNFLSNLTRIFRIMAQSLMLGLGGYLAIKHEITTGMIVAGSILLGRILGPID
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Known secondary structure (DSSP) TTTTTTS
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TIVNGWRQIGNTKVAYTRLNEFLKFLPEPKGEIELSNVVVVPPEGKTPVLRNINMRILPGEFVAIIGPSG
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Known secondary structure (DSSP) TGGG




S


TT

S
S
TT


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SGKSSLVRTILGIWLPVHGTVEIDGADLKQWDRDYFGKFVGYLPQDIELFEGTVAENIARFGELDSEKII
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Known secondary structure (DSSP) S
TSS
TTTTSS
TTTGGGG
TT



STTTS


 .........430.........440.........450.........460.........470.........480.........490
Sequence EAAKLSGAHDVIIKLPDGYDTYIGPGGITLSGGQRQRIALARALYGNPRIVILDEPDSNLDEQGEQALYN
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Known secondary structure (DSSP) STSTTTTT

GGGTTS
TTT

SSTTTT

 .........500.........510.........520.........530.........540
Sequence ALIELKKRKVTTIIVSHRIRLLNLVDKIAIMQDGTLKAFGKADIIIQKLL
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Known secondary structure (DSSP) TT



GGGGGGGSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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