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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kztB_

Fold library idPDB HeaderMoleculeTitle
c5kztB_1.85PDB header: peptide binding proteinChain: B: PDB Molecule: peptide/nickel transport system substrate-binding protein;


Added to library: Thu Feb 9 14:42:52 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASGEQVLNLTESALIPSADSTKADDQVGLNVVNQTNEGLYALDKDGIPAIAGAAEEPKISDDKTVYTIKL
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Known secondary structure (DSSP)
BS

SS

S


TTT

S


S
TTS
SSBSS


TTS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence REDAKWSNGDPVTANDYVYSWRRAVDPNTAATYSYLFDAIKNGGDIVAGKKKPEELGIKAVDDYTLEVTL
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Known secondary structure (DSSP)
TT
B
TTS
B


GGG

GGGGGGGGBTTTTSS
GGGSSTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKPTAYINSLFAFPTFFPLNEKFVTEKGEKYAQNSDNMLFNGPFELKDWTGTNKKWTYVKNDKYWDKDKV
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Known secondary structure (DSSP) SS

TTTSGGGS


GGGTTSSGGG



SSS

SS
S
TT
TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KLKQINVQVVQDSGTGLNLYNTDKVDRTVLSADYAAQNKNNKDYVTVNNSSTFYIKFNQKRAGKDTVFAN
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Known secondary structure (DSSP)

S

STTS
S
TTTTSTT

TT
GGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KNIRKAIALAIDKQSYTDTVLKNGSKPANNLVPEGFTFDPGNKEDYTKESGKHLEYDVKEAQKAWKAGLK
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Known secondary structure (DSSP) TS
TT
SS

SSSS
TTS
B
TTT

B


S


 .........360.........370.........380.........390.........400.........410.........420
Sequence ELGVNEITVEFTSDDTENARKSSEFIQDQLQKNLDGLTVKLKNVPFKVRLQNDQNQDYDFSMSGWGPDYQ
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Known secondary structure (DSSP) T
S
SSSTT
TT

S

SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DPSTFLDLFVTDGAQNRMSYSNKDYDKILNDQKRWDEMVKAEKILLTDDVAIQPLYQRSTAYLQKDYIKN
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Known secondary structure (DSSP) STGGGSTT
TTT
S





TTTT


TT
 .........500.........510
Sequence LQKNPFGPDYTYKETYLTKL
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Known secondary structure (DSSP)

SSSSS
TT
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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