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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kzfJ_

Fold library idPDB HeaderMoleculeTitle
c5kzfJ_3.49PDB header: hydrolaseChain: J: PDB Molecule: proteasome-associated atpase;


Added to library: Sat May 20 08:34:28 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPSGYGVLLATHDDDTVDVFTSGRKMRLTCSPNIDAASLKKGQTVRLNEALTVVEAGTFEAVGEISTLRE
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Known secondary structure (DSSP)


TTSTTB
TTS
TTT

TT
TT






S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILADGHRALVVGHADEERVVWLADPLIAEDLPDGLPEALNDDTRPRKLRPGDSLLVDTKAGYAFERIPKA
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Known secondary structure (DSSP)
TTSS
TTS


TT




TT
STT

SS



TT
TTTT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAV
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Known secondary structure (DSSP) S
TTSS







TTTS
S
TSTT




SSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANSLAKKMASYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFETTVVPQLLS
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Known secondary structure (DSSP)




B


STTTTTTTSSS

SSTTTS
SGGGG



STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFD
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Known secondary structure (DSSP) TTS

SS
SSSS
GGGTSTTT




S
TTS
B
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GDRSACIKAMIEKVVDRMYAEIDDNRFLEVTYANGDKEVMYFKDFNSGAMIQNVVDRAKKNAIKSVLETG
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Known secondary structure (DSSP) T
S


TTSTTS



 .........430.........440.........450.........460.........470.........480....
Sequence QPGLRIQHLLDSIVDEFAENEDLPNTTNPDDWARISGKKGERIVYIRTLVTGKSSSASRAIDTE
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Known secondary structure (DSSP)

SB
S
TT

TS



SSSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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