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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kxiC_

Fold library idPDB HeaderMoleculeTitle
c5kxiC_3.94PDB header: transport proteinChain: C: PDB Molecule: neuronal acetylcholine receptor subunit beta-2;


Added to library: Thu Feb 9 21:07:47 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWK
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Known secondary structure (DSSP)
STTT

TTS


SSSSS
TTTT
GGG


 .........80.........90.........100.........110.........120.........130.........140
Sequence PEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFD
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Known secondary structure (DSSP) TGGGTT


TTTS



S
BSS


S
SS


TTS






SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWDIVALPGRRNENPDDSTYVDITYDFIIRRKPL
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Known secondary structure (DSSP) SS

TTTS
SS
B
TT



SS

SSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence FYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTM
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Known secondary structure (DSSP) TTTTS
GGGSTTTS
S
SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence VLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPALLFSEDWKYVAMVIDRLFLWIFVFVCVFGT
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Known secondary structure (DSSP) S

TT



TT

 ........
Sequence IGMFLQPL
Predicted secondary structure


SS confidence







Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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