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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kwbA_

Fold library idPDB HeaderMoleculeTitle
c5kwbA_1.91PDB header: viral proteinChain: A: PDB Molecule: spike glycoprotein;


Added to library: Sat Jun 10 08:20:27 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKPVATVHRRIPDLPDCDIDKWLNNFNVPSPLNWERKIFSNCNFNLSTLLRLVHTDSFSCNNFDESKIYG
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Known secondary structure (DSSP)




S

TT

B

T
S
GGG

S
TSS
GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SCFKSIVLDKFAIPNSRRSDLQLGSSGFLQSSNYKIDTTSSSCQLYYSLPAINVTINNYNPSSWNRRYGF
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Known secondary structure (DSSP)
S

GGGGGGGSTT

ST



SSS
GGG





TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NNFNLSSHSVVYSRYCFSVNNTFCPCAKPSFASSCKSHKPPSASCPIGTNYRSCESTTVLDHTDWCRCSC
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Known secondary structure (DSSP)





TTS



TT


SB
TT

BS


B
B

TT




TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPDPITAYDPRSCSQKKSLVGVGEHCAGFGVDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVSNNRCNI
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Known secondary structure (DSSP)
S
TTT
S
GGG
SS



TT






B
GGGBSBTT

TTSB

B
GGGB
S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FSNFILNGINSGTTCSNDLLQPNTEVFTDVCVDYDLYGITGQGIFKEVSAVYYNSWQNLLYDSNGNIIGF
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Known secondary structure (DSSP) STT
SS
SS








SSTT
GGG


SSS
TTS
 .........360....
Sequence KDFVTNKTYNIFPC
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Known secondary structure (DSSP)
TTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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