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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kqwD_

Fold library idPDB HeaderMoleculeTitle
c5kqwD_2.23PDB header: transferaseChain: D: PDB Molecule: 4-aminobutyrate transaminase;


Added to library: Sat Jul 15 08:37:01 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLDQLFEMDRAHFMHPSTHAHDHASGALPGRIITGGKGIRIQDHEGREYIDAFAGLYCVNIGYGRTEVAD
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Known secondary structure (DSSP)



SSS
TSS



BTTT

TTT
TT
B

 .........80.........90.........100.........110.........120.........130.........140
Sequence AIYEQAKELAYYHTYVGHSTEAIIELSSRIIRDWAPAGMKKVYYGMSGSDANETQIKLVWYYNNVLGRPQ
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Known secondary structure (DSSP) S




TT


TS
TTSSTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KKKIISRQRGYHGSGIMTGSLTGLPSFHQHFDLPIERIKHTVCPHWYKAPAGMSEAQFVRYCADELEKLI
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Known secondary structure (DSSP)

TT



SSS


GGGTTTTT
S
TT



GGGSSTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence LAEGPDTVAAFIGEPVMGTGGIIPPPQGYWEAIQAVLNKYDILLIADEVVCGFGRLGSKMGSQHYGMKPD
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Known secondary structure (DSSP)
GGG
SSBTTTT
B


TTTT

TTTTTTTTSSSST


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LITVAKGLTSAYAPLSGVIVGEKVWDVIEKGSQEHGPMGHGWTYSGHPICAAAALANLDILERENLTGNA
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Known secondary structure (DSSP)
GGGTTTSS


S
S


TTTT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADVGAYLQQRLRETFGGHPLVGEVRGVGMLAALEFMADKDARTPFDPALKVGPKVSAACLEDGMIARAMP
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Known secondary structure (DSSP) TT
TTTT
SBTTTTB


GGG
TT

S
 .........430.........440.........450.......
Sequence HGDILGFAPPLVITRAEVDEIVGIAKQAVDEVADEVL
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Known secondary structure (DSSP) SSS


TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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