Fold library entry viewer: c5kneD_

Added to library: Sat Jul 30 14:41:56 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	F	T	E	R	A	L	T	I	L	T	L	A	Q	K	L	A	S	D	H	Q	H	P	Q	L	Q	P	I	H	I	L	A	A	F	I	E	T	P	E	D	G	S	V	P	Y	L	Q	N	L	I	E	K	G	R	Y	D	Y	D	L	F	K	K	V	V	N	R	N	L	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T	T											T	T	S			S	S			T								S	S	S	S		S		S						S	T	T	T	T	T	S	S														T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	P	Q	Q	Q	P	A	P	A	E	I	T	P	S	Y	A	L	G	K	V	L	Q	D	A	A	K	I	Q	K	Q	Q	K	D	S	F	I	A	Q	D	H	I	L	F	A	L	F	N	D	S	S	I	Q	Q	I	F	K	E	A	Q	V	D	I	E	A	I	K	Q	Q	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	T	T	T															G	G	G	G	T	T	T	T		S	S											T	T	T	S	S	B		S	S	S		B					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	L	R	G	N	T	R	I	D	S	R	G	A	D	T	N	T	P	L	E	Y	L	S	K	Y	A	I	D	M	T	E	Q	A	R	Q	G	K	L	D	P	V	I	G	R	E	E	E	I	R	S	T	I	R	V	L	A	R	R	I	K	S	N	P	C	L	I	G	E	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S	T	T					S	S					S	S		S				T	T				S						T	T		S					S												T	T		S	S								S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	G	K	T	A	I	I	E	G	V	A	Q	R	I	I	D	D	D	V	P	T	I	L	Q	G	A	K	L	F	S	L	D	L	A	A	L	G	D	F	E	E	R	F	K	G	V	L	K	E	I	E	E	S	K	T	L	I	V	L	F	I	D	E	I	H	M	L	M	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														T	T		S											B									S														T		S	S							S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	N	I	L	K	P	A	L	S	R	G	Q	L	K	V	I	G	A	T	T	N	N	E	Y	R	S	I	V	E	K	D	G	A	F	E	R	R	F	Q	K	I	E	V	A	E	P	S	V	R	Q	T	V	A	I	L	R	G	L	Q	P	K	Y	E	I	H	H	G	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S						T	T														T	T						S	T	T	T	T	T																														T		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	L	D	S	A	L	V	T	A	A	Q	L	A	K	R	Y	L	P	Y	R	R	L	P	D	S	A	L	D	L	V	D	I	S	C	A	G	V	A	V	A	R	D	S	K	P	E	E	L	D	S	K	E	R	Q	L	Q	L	I	Q	V	E	I	K	A	L	E	R	D	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S																							S	S																							T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	D	S	T	T	K	D	R	L	K	L	A	R	Q	K	E	A	S	L	Q	E	E	L	E	P	L	R	Q	R	Y	N	S	M	I	Q	N	V	V	D	S	D	T	I	S	E	T	A	A	R	L	T	G	I	P	V	K	K	L	S	E	S	E	N	E	K	L	I	H	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	T	T	T													S	S	S							T	T						B			S												S	S										S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	D	L	S	S	E	V	V	G	Q	M	D	A	I	K	A	V	S	N	A	V	R	L	S	R	S	G	L	A	N	P	R	Q	P	A	S	F	L	F	L	G	L	S	G	S	G	K	T	E	L	A	K	K	V	A	G	F	L	F	N	D	E	D	M	M	I	R	V	D	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S															T	S	T	T	S	S		S	S											T	T	S	S												T	T	S		S	T	T						G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	E	L	S	E	K	Y	A	V	S	K	L	L	G	T	T	A	Y	D	E	G	G	F	L	T	N	Q	L	Q	Y	K	P	Y	S	V	L	L	F	D	E	V	E	K	A	H	P	D	V	L	T	V	M	L	Q	M	L	D	D	G	R	I	T	S	G	Q	G	K	T	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S	T						S			S							T	T	T								S	S						S	S	G	G	G	S													T	T	T					S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	C	S	N	C	I	V	I	M	T	S	N	L	G	A	E	F	I	N	S	Q	Q	G	S	K	I	Q	E	S	T	K	N	L	V	M	G	A	V	R	Q	H	F	R	P	E	F	L	N	R	I	S	S	I	V	I	F	N	K	L	S	R	K	A	I	H	K	I	V	D	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S								G	G	G	T	T						T	T																		S							T		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	K	E	I	E	E	R	F	E	Q	N	D	K	H	Y	K	L	N	L	T	Q	E	A	K	D	F	L	A	K	Y	G	Y	S	D	D	M	G	A	R	P	L	N	R	L	I	Q	N	E	I	L	N	K	L	A	L	R	I	L	K	N	E	I	K	D	K	E	T	V	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S																					B	T	T	T	B	T	T	T																				S	S	S		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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