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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5klhB_

Fold library idPDB HeaderMoleculeTitle
c5klhB_1.65PDB header: membrane proteinChain: B: PDB Molecule: surface glycoprotein;


Added to library: Sat Jul 8 08:19:37 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DDPRDNFKKAVSAFDPKPLESWTGTFSDVKATVRRQSLSVAGLGSIPSVYTEATVPVSGNTDGSQLVVKV
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Known secondary structure (DSSP)




GGGGG

TT



TTS


STTSBSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NINTVAPFTRRSPLHATRERWFSCSSSQCSGYSRKCDCQEKHEQFRNKCYSQGGQYSTQSSKCRLGEKCG
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Known secondary structure (DSSP) TTB

S

GGG

SSSS

B
TT
S
TT
BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YCKQEVYLSKLYLVAASDGKGEYRESTQYQSALYSFGHLSQGYEAVPQDKVQVQLYSEGDPFIALERETM
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Known secondary structure (DSSP)
SSS

SS
S
SSTT

TT

SS

STT
TT
 .....
Sequence GEGEF
Predicted secondary structure




SS confidence




Known secondary structure (DSSP) T
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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