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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kiaA_

Fold library idPDB HeaderMoleculeTitle
c5kiaA_2.10PDB header: oxidoreductaseChain: A: PDB Molecule: l-threonine 3-dehydrogenase;


Added to library: Thu Feb 23 11:28:05 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence HMKALAKLEPGLTLTRVKKPEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVMHVGHEYVGEIVEM
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Known secondary structure (DSSP)












TT

TT
TT



B


 .........80.........90.........100.........110.........120.........130.........140
Sequence GQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNREGAFAEYLAIPAFNAFKIPPEISDD
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Known secondary structure (DSSP)
TT

S

TT

S

S
STT
GGG
SS
BTTTB

SSBSGGG

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAAIFDPFGNATHTALSFNLVGEDVLITGAGPIGVMAVAIAKHVGARNVVITDINDYRLDLARRMGATRA
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Known secondary structure (DSSP) TTTSS

TT



STT
S
S
TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VNVSRESLRDVMADLHMTEGFDVGLEMSGVPSAFTSLLESMNHGGKVALLGIPPAQTAIDWNQVIFKGLE
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Known secondary structure (DSSP) TTTS
TT
TT

S


S


TT



TT
 .........290.........300.........310.........320.........330.........
Sequence IKGIYGREMFETWYKMVAMLQSGLDLSPIITHRFAVDDYEKGFAAMLSGESGKVILDWA
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Known secondary structure (DSSP)

SS

TT


GGGGGGS

S


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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