Fold library entry viewer: c5kdvA_

Added to library: Thu Feb 9 16:30:49 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	T	Q	E	E	I	L	D	A	A	L	V	S	G	D	S	S	Q	L	T	D	S	H	L	V	A	L	R	L	Q	Q	Q	V	E	R	I	R	Q	T	R	T	Q	L	L	D	G	L	Y	Q	N	L	S	Q	A	Y	D	P	G	A	A	S	M	W	V	L	P	A	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T																															T	T	S				B				S	S								S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	N	T	L	P	F	L	I	G	D	K	G	R	V	L	A	S	L	S	L	E	A	G	G	R	G	L	A	Y	G	T	N	V	L	T	Q	L	S	G	T	N	A	A	H	A	P	L	L	K	R	A	V	Q	W	L	V	N	G	D	P	G	A	A	T	A	K	D	F	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								T	T										G	G	G							S	S		G	G	G	S	T	T	T	T	T	G	G	G														S	S	T	T	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	V	G	V	D	K	T	A	A	L	N	G	L	K	S	A	G	L	Q	P	A	D	A	A	C	N	A	L	T	D	A	S	C	A	S	T	S	K	L	L	V	L	G	N	G	A	S	A	A	S	L	S	A	T	V	R	A	R	L	Q	A	G	L	P	I	L	F	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S												T	T								S		T	T	T									S						T	T				T	T												T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	N	G	W	N	Q	S	S	T	G	Q	Q	I	L	A	G	L	G	L	Q	E	G	P	Y	G	G	N	Y	W	D	K	D	R	V	P	S	S	R	T	R	T	R	S	V	E	L	G	G	A	Y	G	Q	D	P	A	L	V	Q	Q	I	V	D	G	S	W	R	T	D	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	S												T	T						T	T	T	T	T	T	T				B		T	T													T	T												T				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	S	K	C	T	S	Y	V	G	R	T	T	C	D	D	V	P	G	L	S	D	F	S	K	R	V	D	V	L	K	G	A	L	D	A	Y	N	Q	K	A	Q	N	L	F	A	L	P	G	T	T	S	L	R	L	W	L	L	W	A	D	A	V	R	Q	N	I	R	Y	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G					T	T					T	T	S	T	T																					T	T			G	G	G	S	T	T																				S		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	K	A	A	D	T	A	R	F	Q	E	T	F	V	A	D	A	I	V	G	Y	V	R	E	A	G	A	A	Q	K	E	L	G	S	Y	A	G	Q	R	Q	Q	S	M	P	V	S	G	S	E	E	T	L	T	L	T	L	P	S	A	Q	G	F	T	A	I	G	R	M	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T												T					B	S	S						S			T	T	T												S	S									S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	G	K	R	L	S	I	R	I	E	D	A	G	Q	A	S	L	A	V	G	L	N	T	Q	R	I	G	S	T	R	L	W	N	T	R	Q	Y	D	R	P	R	F	L	K	S	P	D	I	K	L	Q	A	N	Q	S	V	A	L	V	S	P	Y	G	G	L	L	Q	L	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T											T	T												G	G	G	S		T	T	S	T	T		B		S		T	T		S								T	T								S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	G	A	T	P	G	Q	T	V	T	V	K	V	T	G	A	A	S	Q	P	F	L	D	I	Q	P	G	E	D	S	S	Q	A	I	A	D	F	I	Q	A	L	D	A	D	K	A	D	W	L	E	I	R	S	G	S	V	E	V	H	A	K	V	E	K	V	R	G	S	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T	T									S		B									T	T	S																T			S							T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	D	Y	G	G	D	V	Q	R	F	I	R	E	L	N	E	V	F	I	D	D	A	Y	T	L	A	G	F	A	I	P	N	Q	A	K	T	P	A	I	Q	Q	E	C	A	A	R	G	W	D	C	D	S	E	T	L	H	K	L	P	G	T	Q	H	I	N	V	D	Q	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T												T	T								T	T		B		T	T														T	T				S						B			S								S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	C	G	G	G	C	S	G	N	P	Y	D	Q	T	W	G	L	N	P	R	G	W	G	E	S	H	E	L	G	H	N	L	Q	V	N	R	L	K	V	Y	G	G	R	S	G	E	I	S	N	Q	I	F	P	L	H	K	D	W	R	V	L	R	E	F	G	Q	N	L	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T				S	S	S				S	S				T	T												T			G	G	G		T	T	G	G	G	G	T	T	T	G	G	G																			S	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	R	V	N	Y	R	N	A	Y	N	L	I	V	A	G	R	A	E	A	D	P	L	A	G	V	N	K	R	L	W	E	D	P	G	T	Y	A	L	N	G	E	R	M	A	F	Y	T	Q	W	V	H	Y	W	A	D	L	K	N	D	P	L	Q	G	W	D	I	W	T	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S													T	T	S	S	S										T				S	T	T	T	T																				T		T	T		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Y	L	H	Q	R	Q	V	D	K	S	D	W	D	A	N	K	A	A	L	G	Y	G	T	Y	A	Q	R	P	G	N	S	G	D	A	S	S	T	D	G	N	D	N	L	L	L	G	L	S	W	L	T	Q	R	D	Q	R	P	T	F	A	L	W	G	I	R	T	S	A	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S						T	T	T	T	T		T	T		S	S								T	T																	T	S	B								T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.
Sequence	Q	A	Q	V	A	A	Y	G	F	A	E	Q	P	A	F	F	Y	A	N	N	R	T	N	E	Y	S	T	V	K	L	L	D	M	S	Q	G	S	P	A	W	P	F	P	L	E	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B									S	S	S	S		G	G	G							S	S	S									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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