Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kdjA_

Fold library idPDB HeaderMoleculeTitle
c5kdjA_2.15PDB header: hydrolaseChain: A: PDB Molecule: f5/8 type c domain protein;


Added to library: Thu Feb 9 18:44:47 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DVLELEMRGDSISEAKKRKVWNFQDWQITGLSARAGDKITVYVDVAEGDPTPTLLYKQSLTQHGGATSFQ
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)







TTS






TT


TT



TT
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LKPGKNEITIPEINYESNGIPKDVIQGGDLFFTNYKSDSQKRAPKVRIEGASKYPVFILGKSDENEVMKE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

S




TTTTT

TTS
S

TTGGG
SS

S


TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LEAYVEKIKAEPKTTPNIFAVSSNKSLEFVQATYALDWYKKNNKTPKYTAEQWDQYIADAMGFWGFDNSK
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) STTTS



SSB
T

TT

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVNSDFNFRIMPMVKNLSGGAFMNAGNGVIGIRPGNQDAILAANKGWGVAHELGHNFDTGGRTIVEVTNN
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) GGGS




B



TT
STT
GGGT

S

TTS

TTTGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence MMPLFFESKYKTKTRITDQNIWENNTYPKVGLDDYSNNELYNKADSTHLAQLAPLWQLYLYDNTFYGKFE
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) SSS
TTTT
S

TT

SS
TT
TT
GGGT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence RQFRERDFGNKNREDIYKSWVVAASDAMELDLTEFFARHGIRVDDKVKEDLAKYPKPDKKIYYLNDLAMN
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)





STS

T



GGGS


SS
GGG

GGGTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YKGDGFTENAKVSVSTSNIKLSFSVDDENKDNILGYEIRRDGKYVGFTSNDSFVDTKVYVVTPYDRKLNT
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)

S
SS
TT




GGGTTTTTSSS


TTS
B
 ........
Sequence LNPIEVNA
Predicted secondary structure





SS confidence







Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D