Fold library entry viewer: c5kcaA_

Added to library: Sat Jul 30 14:23:45 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	K	V	A	F	S	A	I	R	S	T	N	H	E	P	S	E	M	S	N	R	T	M	I	I	Y	F	D	Q	V	L	V	N	I	G	N	N	F	D	S	E	R	S	T	F	I	A	P	R	K	G	I	Y	S	F	N	F	H	V	V	K	V	Y	N	R	Q	T	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									B											T	S				T	T	T	T					S	S	S																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	S	L	M	L	N	G	W	P	V	I	S	A	F	A	G	D	Q	D	V	T	R	E	A	A	S	N	G	V	L	I	Q	M	E	K	G	D	R	A	Y	L	K	L	E	R	G	N	L	M	G	G	W	K	Y	S	T	F	S	G	F	L	V	F	P	L	S	A	K	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T											S	S																T	T										S			T	T			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	S	A	I	R	S	T	N	H	E	P	S	E	M	S	N	R	T	M	I	I	Y	F	D	Q	V	L	V	N	I	G	N	N	F	D	S	E	R	S	T	F	I	A	P	R	K	G	I	Y	S	F	N	F	H	V	V	K	V	Y	N	R	Q	T	I	Q	V	S	L	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				B											T	S				T	T	T	T						S	S													S	B		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	G	W	P	V	I	S	A	F	A	G	D	Q	D	V	T	R	E	A	A	S	N	G	V	L	I	Q	M	E	K	G	D	R	A	Y	L	K	L	E	R	G	N	L	M	G	G	W	K	Y	S	T	F	S	G	F	L	V	F	P	L	G	S	S	G	S	A	K	V	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T											S	S		S														T	T										S			T	T			T	T											S					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	A	I	R	S	T	N	H	E	P	S	E	M	T	M	I	I	Y	F	D	Q	V	L	V	N	I	G	N	N	F	D	S	E	R	S	T	F	I	A	P	R	K	G	I	Y	S	F	N	F	H	V	V	K	V	Y	N	R	Q	T	I	Q	V	S	L	M	L	N	G	W	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S					B											T	S				T	T	T	T						S	S															S	S									T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	I	S	A	F	A	G	D	Q	D	V	T	R	E	A	A	S	N	G	V	L	I	Q	M	E	K	G	D	R	A	Y	L	K	L	E	R	G	N	L	M	G	G	W	K	Y	S	T	F	S	G	F	L	V	F	P	L	S	D	S	I	I	H	I	G	A	I	F	D	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		S														T	T										S			T	T			T	T															S									T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	K	K	D	D	E	V	F	R	T	A	V	G	D	L	N	Q	N	E	E	I	L	Q	T	E	K	I	T	F	S	V	T	F	V	D	G	N	N	P	F	Q	A	V	Q	E	A	C	E	L	M	N	Q	G	I	L	A	L	V	S	S	I	G	C	T	S	A	G	S	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T		T	T	S	S	T	T												T	T																		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	L	A	D	A	M	H	I	P	H	L	F	I	Q	R	S	T	A	G	T	P	R	S	G	C	G	L	T	R	S	N	R	N	D	D	Y	T	L	S	V	R	P	P	V	Y	L	H	D	V	I	L	R	V	V	T	E	Y	A	W	Q	K	F	I	I	F	Y	D	S	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T										S	T	T												S	S	S								S																T	T										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	I	R	G	I	Q	E	F	L	D	K	V	S	Q	Q	G	M	D	V	A	L	Q	K	V	E	N	N	I	N	K	M	I	T	T	L	F	D	T	M	R	I	E	E	L	N	R	Y	R	D	T	L	R	R	A	I	L	V	M	N	P	A	T	A	K	S	F	I	T	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G										T	T										S													S												T	T						S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	E	T	N	L	V	A	F	D	C	H	W	I	I	I	N	E	E	I	N	D	V	D	V	Q	E	L	V	R	R	S	I	G	R	L	T	I	I	R	Q	T	F	P	V	P	Q	N	I	S	Q	R	C	F	R	G	N	H	R	I	S	S	T	L	C	D	P	K	D	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		T	T								S																S													S	S	G	G	G	G	G			T	T										T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	Q	N	M	E	I	S	N	L	Y	I	Y	D	T	V	L	L	L	A	N	A	F	H	K	K	L	E	D	R	K	W	H	S	M	A	S	L	S	C	I	R	K	N	S	K	P	W	Q	G	G	R	S	M	L	E	T	I	K	K	G	G	V	S	G	L	T	G	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T	T	B									S	S		T	T					T	T										T						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Sequence	F	G	E	N	G	G	N	P	N	V	H	F	E	I	L	G	T	N	Y	G	G	V	R	K	L	G	C	W	N	P	V	T	G	L	N	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	B																								T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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