Fold library entry viewer: c5kbuA_

Added to library: Sat Jul 16 08:27:57 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	S	I	Q	I	G	G	L	F	P	R	G	A	D	Q	E	Y	S	A	F	R	V	G	M	V	Q	F	S	T	S	E	F	R	L	T	P	H	I	D	N	L	E	V	A	N	S	F	A	V	T	N	A	F	C	S	Q	F	S	R	G	V	Y	A	I	F	G	F	Y	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T															T			S	S												T	T															T	T		S								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	S	V	N	T	I	T	S	F	C	G	T	L	H	V	S	F	I	T	P	S	F	P	T	D	G	T	H	P	F	V	I	Q	M	R	P	D	L	K	G	A	L	L	S	L	I	E	Y	Y	Q	W	D	K	F	A	Y	L	Y	D	S	D	R	G	L	S	T	L	Q	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T											T	T							S				S	S			S	S					S														T	T		S								G	G	G		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	D	S	A	A	E	K	K	W	Q	V	T	A	I	N	V	G	N	I	N	N	D	K	K	D	E	T	Y	R	S	L	F	Q	D	L	E	L	K	K	E	R	R	V	I	L	D	C	E	R	D	K	V	N	D	I	V	D	Q	V	I	T	I	G	K	H	V	K	G	Y	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T									S	S			S	S	S	T	T	T	T	T	T	T					T	T	T	T	T																								T	T	T	B	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	I	I	A	N	L	G	F	T	D	G	D	L	L	K	I	Q	F	G	G	A	E	V	S	G	F	Q	I	V	D	Y	D	D	S	L	V	S	K	F	I	E	R	W	S	T	L	E	E	K	E	Y	P	G	A	H	T	A	T	I	K	Y	T	S	A	L	T	Y	D	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	B	S	S	S	S			S	S	S	S	S	S	B								S	S		T	T	S											T	T	S		T	T	T	S	T	T			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	V	M	T	E	A	F	R	N	L	R	K	Q	R	I	E	I	S	R	R	G	N	A	G	D	C	L	A	N	P	A	V	P	W	G	Q	G	V	E	I	E	R	A	L	K	Q	V	Q	V	E	G	L	S	G	N	I	K	F	D	Q	N	G	K	R	I	N	Y	T	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T						S	S					T	T		S	S					T										T	T						T	T					B		S	S	S		B		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	M	E	L	K	T	N	G	P	R	K	I	G	Y	W	S	E	V	D	K	M	V	L	T	E	D	D	T	S	G	L	E	Q	K	T	V	V	V	T	T	I	L	E	S	P	Y	V	M	M	K	K	N	H	E	M	L	E	G	N	E	R	Y	E	G	Y	C	V	D	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S										T	T	T									T	T		S	S												T	T	T	S				T	T	G	G	G			G	G	G	G			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	E	I	A	K	H	C	G	F	K	Y	K	L	T	I	V	G	D	G	K	Y	G	A	R	D	A	D	T	K	I	W	N	G	M	V	G	E	L	V	Y	G	K	A	D	I	A	I	A	P	L	T	I	T	L	V	R	E	E	V	I	D	F	S	K	P	F	M	S	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T									S	S						B		T	T	T			B									T	T	S		S				S			B							T	T					S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	S	I	M	I	K	K	P	Q	K	S	K	P	G	V	F	S	F	L	D	P	L	A	Y	E	I	W	M	C	I	V	F	A	Y	I	G	V	S	V	V	L	F	L	V	S	T	N	E	F	G	I	F	N	S	L	W	F	S	L	G	A	F	M	Q	P	R	S	L	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	G	G	G	T	T	T	T	S																	T	T	G	G	G	T														T	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	I	V	G	G	V	W	W	F	F	T	L	I	I	I	S	S	Y	T	A	N	L	A	A	F	L	T	V	E	R	M	V	S	P	I	E	S	A	E	D	L	S	K	Q	T	E	I	A	Y	G	T	L	D	S	G	S	T	K	E	F	F	R	R	S	K	I	A	V	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					S	T								S	S					B	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	M	W	T	Y	M	R	S	A	E	P	S	V	F	V	R	T	T	A	E	G	V	A	R	V	R	K	S	K	G	K	Y	A	Y	L	L	E	S	T	M	N	E	Y	I	E	Q	R	K	P	C	D	T	M	K	V	G	G	N	L	D	S	K	G	Y	G	I	A	T	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S				B	S	S										T	T	T	T	S															T	S	T	T							S			S	S										T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	S	S	L	G	T	P	V	N	L	A	V	L	K	L	S	E	Q	G	L	L	D	K	L	K	N	K	W	W	Y	D	K	G	E	C	G	A	K	D	S	G	S	K	E	K	T	S	A	L	S	L	S	N	V	A	G	V	F	Y	I	L	V	G	G	L	G	L	A	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S														T	T											T	T	T		S		S	S	T	T	T	S	T	T					S			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	A	L	I	E	F	C	Y	K	S	R	A	G	L	F	D	R	G	V	Q	M	L	L	T	T	V	G	A	F	A	A	F	S	L	M	T	I	A	V	G	T	D	Y	W	L	Y	S	R	G	V	V	M	T	H	S	G	L	W	R	T	C	C	L	E	G	N	F	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										S		S													S	S							T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	C	K	Q	I	D	H	F	P	E	D	A	D	Y	E	A	D	T	A	E	Y	F	L	R	A	V	R	A	S	S	I	F	P	I	L	S	V	I	L	L	F	M	G	G	L	C	I	A	A	S	E	F	Y	K	T	R	H	N	I	I	L	S	A	G	I	F	F	V	S	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S				S					T	T	T	S	S		T	T	T																								S	S	S	S			S	S	T	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.
Sequence	L	S	N	I	I	G	I	I	V	Y	I	S	A	N	A	G	D	P	S	K	S	D	S	K	K	N	S	Y	S	Y	G	W	S	F	Y	F	G	A	L	S	F	I	I	A	E	M	V	G	V	L	A	V	H	M	F	I	D	R	H	K	Q	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S		S	S	S	S					S	T

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PDB structure

FASTA sequence

Hidden Markov model

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