Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k9oI_

Fold library idPDB HeaderMoleculeTitle
c5k9oI_3.39PDB header: immune systemChain: I: PDB Molecule: hemagglutinin;


Added to library: Thu Feb 9 13:18:50 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
B







SS
SSBSSS










SSSS



S

T
TTS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence STASSWSYIVETPSSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAG
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)


S
BS

TT





SSS
BTTSSS
TTTS
SSSB
TT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADTYVFVGSSRYSKKF
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) S

TT
B

SS





SSS

SSS
SS


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQ
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)








BTTBSS
TT
SSSS
SS











SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGGFIEGGWTGMVDGWYGYHHQNE
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) BTTB




SS
S
S


SS




S


S
B





TT


S
S
BSS

S
S
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKV
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) S





 .........430.........440.........450.........460......
Sequence RSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKL
Predicted secondary structure















SS confidence













































Known secondary structure (DSSP)
SSS
SSSSS


T




S


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D