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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k94B_

Fold library idPDB HeaderMoleculeTitle
c5k94B_2.10PDB header: protein transportChain: B: PDB Molecule: maltose-binding periplasmic protein,protein translocase


Added to library: Sat Jun 10 08:38:18 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGY
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Known secondary structure (DSSP)


TTS

TTS





SSTTT
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELK
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Known secondary structure (DSSP) TT
B





TTB
TTT
S

TTT
SS

SBGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKGKSALMFNLQEPYFTWPLIAADGGYAFKYAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDE
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Known secondary structure (DSSP) TTT




SSTT


TT
TTGGG

B
SS


SS


SSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence KSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVD
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Known secondary structure (DSSP) TTT
TTSS
TT

TTSGGGT

BTTTTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence EHTGRTMQGRRWSDGLHQAVEAKEGVQIQNEYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE
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Known secondary structure (DSSP) SSSS







TTTT




SSSTTSS
TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYL
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Known secondary structure (DSSP) TTS
GGGT




BBTTB



BTT
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGR
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Known secondary structure (DSSP) SSS


SBTTSS


STTTS
 .........500......
Sequence QTVDEALKDAQTRITK
Predicted secondary structure


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Known secondary structure (DSSP) S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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