Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k8gA_

Fold library idPDB HeaderMoleculeTitle
c5k8gA_2.00PDB header: cell adhesionChain: A: PDB Molecule: antifreeze protein;


Added to library: Sat Sep 9 08:31:06 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATAGTVTVNAITSDDTIDGIELGQTISISGKAVGGDISVGDVVKMTINNTEYSTTVKAGGIWMIAGVLGS
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)





SSTTS
TTGGGSSTT

TT
TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLAADSEFDVVVTSSDAAGNKVQSIGTSTHSVDLSAEANFSLAEGQQHVLTNLPEGFGFPDGTTEVVTNF
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


TT




TTS

S

TT



TT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGTITLGDDGEYRYDAPVRDHGDAVSDKDSVTVTLEDGRTFTVNLDIQDSAPVAVDDQDSIVVQHEEFEV
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S

TTS





TTSSS


TTS




B




 .........220.........230.........240.........250.........260.........270.........280
Sequence SEIAASWVSYTHGESVTTFDGTSDLGGVDNDSAKDQIRWGNPAESKQSGYGFIDNDSNLEGRFDLNQDIS
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)



SS


BTTTB


SS
S

S
BSSSS

TTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VGTFTHYNYPVYSGGAITSAEMSVEFSVLDHLGVSTPVTLTVNFDHNETPNTNDVNASRDIVTVQNTHVT
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

B
TT
S
TTS





S




 .........360.........370.........380.........390.........400.........410.........420
Sequence FERDGDIYTVQIVGFREVGNPDGEVVTSIYTNENAATSYELVVRVVEGDGYSLPSTEGNIFDDNGLGADS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTTT
TTS

BS
TTTTSS

STTS
SSS


B
 .........430.........440.........450.........460.........470.........480.........490
Sequence LGADGSVTVVGVAVGAIVSSNESVGHSIEGQYGNLVLNSDGSYVYDVTASVSDIPAGATESFAYLIQDQD
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
TTT


SS


S
S
TTS
SS
TTS
S
GGG

SS

TT
 .........500.........510.
Sequence GSTSSANLSINVGTNTASTPD
Predicted secondary structure










SS confidence




















Known secondary structure (DSSP) S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D