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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k6kB_

Fold library idPDB HeaderMoleculeTitle
c5k6kB_1.89PDB header: viral proteinChain: B: PDB Molecule: zika virus protein;


Added to library: Sat Jul 9 08:26:02 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NADVGCSVDFSKKETRCGTGVFIYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEEGICGISSVSRMENIMW
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Known secondary structure (DSSP)

TTTT





SS
SS

S
TT



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVDGD
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Known secondary structure (DSSP) TT






SSB


SB




SS







SSGGGTS




S
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLKECPLEHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGREAAHSDLGYWIESEKND
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Known secondary structure (DSSP)
TTTS
GGG
S


SSS
SS


B

GGG
TT
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TWRLKRAHLIEMKTCEWPKSHTLWTDGVEESDLIIPKSLAGPLSHHNTREGYRTQVKGPWHSEELEIRFE
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Known secondary structure (DSSP) SS

B
SB

GGG
S

TT

GGG
SS
GGGT


SGGG

TT



TTS
TTSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ECPGTKVYVEETCGTRGPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRS
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Known secondary structure (DSSP)

TT

TTS

S
S
BBSB
TT

B

SS

SS
TT
TT
SSS
GGGS
B
 ....
Sequence MVTA
Predicted secondary structure

SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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