Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k47C_

Fold library idPDB HeaderMoleculeTitle
c5k47C_4.20PDB header: transport proteinChain: C: PDB Molecule: polycystin-2;


Added to library: Thu Feb 9 15:49:31 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence REKYLKSVLRELVTYLLFLIVLCILTYGMMSSNVYYYTRMMSQLFLDTPVSKTEKTNFKTLSSMEDFWKF
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)


TTTTSBSSTTSS
BSTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TEGSLLDGLYWKMQPDNRSFIFYENLLLGVPRIRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPF
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP) T









TTT
S

B
TT
S


GGGTTT








TTTB

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence GPRNGTAWIYTSEKDLNGSSHWGIIATYSGAGYYLDLSRTREETAAQVASLKKNVWLDRGTRATFIDFSV
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) SS

STTTS


TTTSS


B

SSS
B
S
S

SSTSS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YNANINLFCVVRLLVEFPATGGVIPSWQFQPLKLIRYVTTFDFFLAACEIIFCFFIFYYVVEEILEIRIH
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTTT

TTSS








SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KLHYFRSFWNCLDVVIVVLSVVAIGINIYRTSNVEVLLQFLEDQNTFPNFEHLAYWQIQFNNIAAVTVFF
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) SSSSSSSTTTTTT
SS



 .........360.........370.........380.........390.........400.........410.........420
Sequence VWIKLFKFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFR
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) GGGGT
SSTTT
STTSS
 .........430.........440.........450.........460.........470.........480....
Sequence IILGDINFAEIEEANRVLGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSD
Predicted secondary structure







SS confidence































































Known secondary structure (DSSP) T



TTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D