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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k2yB_

Fold library idPDB HeaderMoleculeTitle
c5k2yB_2.41PDB header: transport proteinChain: B: PDB Molecule: probable periplasmic sugar-binding lipoprotein uspc;


Added to library: Sat Jun 4 08:50:20 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IVVTVRLWDEPIAAAYRQSFAAFTRSHPDIEVRTNLVAYSTYFETLRTDVAGGSADDIFWLSNAYFAAYA
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Known secondary structure (DSSP)
S

TT


TT


S
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DSGRLMKIQTDAADWEPAVVDQFTRSGVLWGVPQLTDAGIAVFYNADLLAAAGVDPTQVDNLRWSRGDDD
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Known secondary structure (DSSP) T
B



S
GGGB
TTT
S



TT

GGGGGG
B

SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLRPMLARLTVDADGRTANTPGFDARRVRQWGYNAANDPQAIYLNYIGSAGGVFQRDGKFAFDNPGAIEA
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Known secondary structure (DSSP)
T
TTS
BTTSTT

GGGBS


SS
TTTTTT

STT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence FRYLVGLINDDHVAPPASDTNDNGDFSRNQFLAGKMALFQSGTYSLAPVARDALFHWGVAMLPAGPAGRV
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Known secondary structure (DSSP) TS

S

GGGTSS
TTTT
BS
GGG

S



BBTTB

 .........290.........300.........310.........320.........330.........340.........350
Sequence SVTNGIAAAGNSASKHPDAVRQVLAWMGSTEGNSYLGRHGAAIPAVLSAQPVYFDYWSARGVDVTPFFAV
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Known secondary structure (DSSP)
BTT
S
STTSTTSSSSBGGGTTT


TG
 .........360.........370.........380.........390.........400
Sequence LNGPRIAAPGGAGFAAGQQALEPYFDEMFLGRGDVTTTLRQAQAAANAAT
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Known secondary structure (DSSP) GGS




TTTT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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