Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5k0uC_

Fold library idPDB HeaderMoleculeTitle
c5k0uC_2.79PDB header: virusChain: C: PDB Molecule: capsid protein vp2;


Added to library: Sat Jul 16 08:15:23 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRLKQITIGNSTITTQDSLHTVLAYGEWPTYLSDIDATSVDKPTHPETSADRFYTLDSVEWQVGSHGWWW
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)


TTSS



GGG






SSS



S

B

GGGTSS



TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence KLPDALKDMGVFGQNMYYHSMGRSGFIIHTQCNATKFHSGALIVAVIPEHQLAYVGGVKVNVGYDHTHPG
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TGGGTTSS



TT
T



BSSSS






G
 .........150.........160.........170.........180.........190.........200.........210
Sequence QSGHQIRGPSQSNDRSGGKPDEDPLFNCNGTLLGNITIFPHQIINLRTNNSSTIVVPYINCVPMDNMLKH
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP) GG





TTS

GGG
B


TTTTTTTS
TTSGGGSSTTT
S



SSS
B
TTT
 .........220.........230.........240.........250.....
Sequence NNLSLVIIPLVPLRPGSSGINSVPITVTIAPYKSEFSGAMEAQRQ
Predicted secondary structure



















SS confidence












































Known secondary structure (DSSP)



SSS


S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D