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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jzgA_

Fold library idPDB HeaderMoleculeTitle
c5jzgA_3.16PDB header: virusChain: A: PDB Molecule: capsid protein vp1;


Added to library: Sat Jul 16 08:15:56 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IETRYVYNTNTNAEADVEMFLGRSALWGKVTLTRQYAKWEINFQEQAHIRKKFEFFTYLRFDMEVTIVTN
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Known secondary structure (DSSP)






S

SSTTTSS
S

GGG

SSS
TTBSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NKGLMQIMFVPPGIDHPETHDDRKWDSASNPSVFFQPKSGFPRFTIPFTGLASAYYMFYDGYDKPKGSDN
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Known secondary structure (DSSP)

S

TTS



STT
GGG

SSS

TTT






SSSSSS

SBSS
TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NEYGIAPTNDMGLLCFRTLDNSGGNDVKIYVKPKHITAWVPRPPRATQYTHKYSTNYHYKPNSSGPDEHV
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Known secondary structure (DSSP)

BSSTTT




SS

S


SB




B


SSS









SSSSTT
 .........220......
Sequence LKDRHFIKTRPLISSA
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Known secondary structure (DSSP)



BS



S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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