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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jxlA_

Fold library idPDB HeaderMoleculeTitle
c5jxlA_3.50PDB header: motor proteinChain: A: PDB Molecule: flagellar hook protein flge;


Added to library: Thu Feb 9 11:33:40 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGGSNPLQIGLGV
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Known secondary structure (DSSP)
TSS
TT








B


SS


B





 .........80.........90.........100.........110.........120.........130.........140
Sequence SVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQGWNI
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Known secondary structure (DSSP)






S
SS

SSS
SSSSSS
S




SSSB
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLNSGLNIGTSSRNLYALDSVHGWNTKTQRAEDE
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Known secondary structure (DSSP) TTTT
TTS


B

TT







SSB

S


B


B

SSS

SSS




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NDTGTTQFYTTSKNSVEVTEKGVDAGALFNANGTGLNLRDGQGIWVSYADAKFTTDRANGANVFDPNLTV
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Known secondary structure (DSSP)

SSS

SSS
S



SSS
B
TT
BB



TT
SS




TT




TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence AQQNNVIFWGNKDIAVTLDINLNGVRIQNDNIRSLDEAIAYINTFTAPTDTRDGTGVKAVKKADGSGIEF
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Known secondary structure (DSSP) S
S





SS

B


TT

S
B
STTSS

SSS





TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VNNNADGTTDNMKNIDLTVNVGNSAGERNTINYNANTGVFSPQGGNLTTAQNDTDWIAGAAQAGQPQNVK
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Known secondary structure (DSSP)


S
SSGGGSS

S

GGG





SSS


SSSS



TTS
SSSSS


SSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence VVTAHKYIYSSNPVTIPPMINPDGGPAFQPNNGNRPTDPASANYWDAIQGSLKNTTERTFRTTEDLRELL
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Known secondary structure (DSSP)


SS








SSSS





SS




TTTGGGS



S
 .........500.........510.........520.........530.........540.........550.........560
Sequence QRDARYGVDYNGSGIIDNATPTFDANDINQAVKVVVTENGNFAISNANETSTIPANAGAGAGAATTNPKN
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Known secondary structure (DSSP) S

TTS



SS





SSS

TT
TTS

S


TTSSS
SS




 .........570.........580.........590.........600.........610.........620.........630
Sequence MSFNITAYSNKQGTVSTNDAFTKIFKAFDGPLVIGNQIKESEQLKLSAFSAGLEIYDSLGSKHTLEVQFV
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Known secondary structure (DSSP)





TT





TGGG
S
SSS




B



B
SSS
B

 .........640.........650.........660.........670.........680.........690.........700
Sequence KQSTTQDGGNEWQMIIRVPEPAEINTTGEGPTNIIVGTARFNNDGSLANYTPKTINFSPNNGAAPNQQIK
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Known secondary structure (DSSP)

SSS



TT
B


SSS

TT

TTS



B

SSS
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAMASVANN
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Known secondary structure (DSSP)


TT
TTS
SS








TT


B
GGG


SSS





S
T
 .........780.........790.........800.........810.........820.........830.........840
Sequence SGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSD
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Known secondary structure (DSSP) TTS
STT


TTT




TTSSS


TT




S
 .........850.
Sequence QMLQTLIQLKQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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