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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jx2A_

Fold library idPDB HeaderMoleculeTitle
c5jx2A_2.05PDB header: transport proteinChain: A: PDB Molecule: glucose/galactose-binding lipoprotein;


Added to library: Thu Feb 9 15:31:39 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RDKPLVFFNRQPSDPGKVDMAAMNWNDKTYYVGFDAKFGGSIQGKMILDFLASSESSVDRNGDGIIGYVL
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Known secondary structure (DSSP)

S
SS
SB



B
TSSTT
GGGT

GGGSTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CIGDVGHNDSKVRTEGIRRALGTWTGSSDPGQAKEGQAVVGGKSYKVVELEGKAMTGTDGSTWNTNSATE
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Known secondary structure (DSSP) S
TT
T


S

STT



TT
B
TT

BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SMGSWVAKFADKIDLVISNNDGMAMGCLQASNYPRGLPIFGYDANADAVESVGKGELTGTVSQNVDAQAV
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Known secondary structure (DSSP) GGGSSTT
TT

TT


SS

TTSS
B

 .........220.........230.........240.........250.........260.........270.........280
Sequence AVLQIIRNLLDGSSGEDVVANGISRPDAHGNISAPVQYWEDVKAIMADNSEVTSANWKEYTRGARDAGVR
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Known secondary structure (DSSP) TT

TBTTTB

TT



S
GGGT


TTTGGGSSTT


TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence QVSAPTKKVLLTVHNASNDFLASAYLPALKHYAPLLNVDLTVVQGDGQNELSCLDKFTNLDMFDAFAVNM
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Known secondary structure (DSSP)





S
TT
TTGGGT

SS
TTT


GGG
S

 .........360.....
Sequence VKTNSGADYTDKLKY
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Known secondary structure (DSSP) SSTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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