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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jwcA_

Fold library idPDB HeaderMoleculeTitle
c5jwcA_2.05PDB header: membrane proteinChain: A: PDB Molecule: nadh dehydrogenase, putative;


Added to library: Sat Mar 25 09:34:57 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RKEKIIILGSGWGGFNFLLNIDFKKYDVTLISPRNYFTFTPLLPCLCSGTLSVNVCTESIRNFLRKKNGY
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Known secondary structure (DSSP)



SSS
TTTS
S
S
GGGTSS
GGGGSB
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CGNYLQLECTDVFYEDKYINCIDIENNKVKLFYDYLIIAVGAKTNTFNINGVDKYAYFVKDIDDALKIRK
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Known secondary structure (DSSP) B


TTTT
TT


S




TT
TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KFLDILEKCTLPNISNEEKKKMLHVAVVGGGPTGVEVTAEFADFINKEVKINYKDIFNFISISIIEGGNN
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Known secondary structure (DSSP) TTSTTS
T

STTTT
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLPTFTQNISDFTKENFHNLNINVLTNYYVIDVDKHSFHIQSSLNKNEKKKLSYGLLIWASGLAQTTLIQ
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Known secondary structure (DSSP) SSTTS
TT
T
SSSS
TT

S



 .........290.........300.........310.........320.........330.........340.........350
Sequence KFLKTIPVQANNAILKVDEKLRVIGIPSNNIYAIGDCKKIQPKLLHEHTNEIIKILTGNKLTSEALKLKQ
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Known secondary structure (DSSP) TTSGGGTT
SS
TTSBBTT
TT


GGG



GGGGSSSS
B
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SELTKTFPQLSISKWDYEKNKKGEMTPQQFHDYLFEIDKNYKSPTPTAQNAKQEAYYLSNVFNNFIHTNQ
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Known secondary structure (DSSP) TT
GGGSTTTS
TTTT



B





SSTTTSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KFNIPSFIEKWKGSLAYIGNHQVVADLPYYELKGGRFSSTFWKVVYIQLLLSWKSRFHFFIDFIKTKWYG
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Known secondary structure (DSSP) TT










TTTT

TTSSS
 .....
Sequence RPFIK
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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