Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jvbB_

Fold library idPDB HeaderMoleculeTitle
c5jvbB_1.95PDB header: transport proteinChain: B: PDB Molecule: phosphonate abc transporter, periplasmic phosphonate-


Added to library: Sat Dec 2 08:23:33 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NKANPQKLVVALLPDESAATVIQNNKGLEMYLENKLNKDIELFVSTDYSSMIEVASKGRLDLAYFGPLSY
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

SS
S

SS
TS
SSTT

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence VLAKTKSNIEPFAALEKDGKNTYQALVIGNAEAGINSYEKIEGKIMAYGDQASTSSHLIPKSMLKQKQLK
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) S
BTTB

TTTT

STTS

TT
TTTTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence AGENYEEVFVGAHDAVAIAVANGKAQAGGLSKPIFTALIERGTIDKNKVIIIAESKPFPQYPWTMRSDLD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) BTTTB
SSTTSSSTTSS
GGG





TTS
 .........220.........230.........240.........250....
Sequence SELKTQIQQAFLELEDKAILKPFKADAFTLVTDQDYDVVRNLGE
Predicted secondary structure









SS confidence











































Known secondary structure (DSSP)


TTTT
S


GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D