Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jubA_

Fold library idPDB HeaderMoleculeTitle
c5jubA_2.57PDB header: transcriptionChain: A: PDB Molecule: transcriptional regulator;


Added to library: Thu Feb 9 20:10:06 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNI
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
TT

TTSSS

TSS


TT

T



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TIPDEYYEMKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVE
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)


S

TT
TTTS



TTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence EIYEDLFEQVKRKRKFSTNDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMA
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) STT
SS

TT
SS

TT



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IAALKIFHNSFSDFLTVVDKALAVIEKSQLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIVFASVLE
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) T

TTT
GGGTS

TT
 .........290........
Sequence DSVLEESIKAGKLADGLG
Predicted secondary structure



SS confidence

















Known secondary structure (DSSP)
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D