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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jt8B_

Fold library idPDB HeaderMoleculeTitle
c5jt8B_2.10PDB header: allergenChain: B: PDB Molecule: blo t 1 allergen;


Added to library: Sat May 27 08:36:34 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence REEIKTFEQFKKVFGKVYRNAEEEARREHHFKEQLKWVEEHNGIDGVEYAINEYSDMSEQEFSFHLSGGG
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Known secondary structure (DSSP)




STT


SSTTGGG

B


TTTTS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNFTYMKMEAAKEPLINTYGSLPQNFDWRQKARLTRIRQQGSCGSWAFAAAGVAESLYSIQKQQSIELSE
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Known secondary structure (DSSP)

S
SS


TT




S
S





B

SS







B
 .........150.........160.........170.........180.........190.........200.........210
Sequence QELVDCTYNRYDPSYQCNGCGSGYSTEAFKYMIRTGLVEERNYPYNMRTQWCDPDVEGQRYHVSGYQQLR
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Known secondary structure (DSSP) SBTTT
TTS
B
TTS


T
B
BGGGS


SS




TT

S

B




 .........220.........230.........240.........250.........260.........270.........280
Sequence YHSSDEDVMYTIQQHGPVVIYMHGSNNYFRNLGNGVLRGVAYNDAYTDHAVILVGWGTVQGVDYWIIRNS
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Known secondary structure (DSSP) TT


S
TTSB
SS
SSSTT




TT
S
 .........290.........300.........310.
Sequence WGTGWGNGGYGYVERGHNSLGINNYVTYATL
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Known secondary structure (DSSP) B
TTTTBTTSSS
GGGTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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