Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jm0A_

Fold library idPDB HeaderMoleculeTitle
c5jm0A_6.30PDB header: hydrolaseChain: A: PDB Molecule: alpha-mannosidase,alpha-mannosidase,alpha-mannosidase;


Added to library: Sat Jun 18 08:28:01 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXKRISLDHDHVKVWWYQVSFSWKSIIERDKKGELEFREANINQPFGPSWSTTWFKVKI
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)

TTTTT







TT


STTTSSSS
S


S




S
S

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLPEDWVKSNEQLLFQWDCSNEGIVIDPKTLIPVTAFSGGERTEYVLPKTSDGKHFFYIEAGNNDDNRFF
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


SSSS





SB



SSS


B


S
SS


B

SSS
S
B









 .........150.........160.........170.........180.........190.........200.........210
Sequence HLRKADLDARALYIDFWMLGDAARELPGDSWQKHQARQLGNAVMNLFDPNDRSSVRKCRELLQREYFDVL
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)

S
TTSTT





 .........220.........230.........240.........250.........260.........270.........280
Sequence TNVYGIGNCHIDTAWLWPFAETRRKIVRSWSSQCTLMDRFPEYKFVASQAQQFKWLLEDHPEFFNKVLIP
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)






SSSSS
TTTSSSS

S
SS
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KIQQSQFFAVGGTWVENDTNIPSGESLARQFFFGQRFFLKHFGLKSKIFWLPDTFGYSSQMPQLCRLSGI
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) SSTT
S



SSSS
TTSGGGGSS


S

B
SS

S

SSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DKFLTQKLSWNNINSFPHSTFNWAGIDGSQLLTHMPPGNTYTADSHFGDVLRTAKQNKTPEYYGSGLMLY
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

SSS


S
SS


SS
TTS



TTTTSSBTT


GGGTTT

SSB


 .........430.........440.........450.........460.........470.........480.........490
Sequence GKGDGGGGPTEEMLQKMRRIRSMNNRNGNVIPKLQVGITVDEFYDDILKRTNQGHDLPTWSGELYFEFHR
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) S

SSSS



TTS
SSSSS

S


S


SS




S


S



 .........500.........510.........520.........530.........540.........550.........560
Sequence GTYTSQAQTKKLMRLSEIKLHDLEWIAAKTSVLYPDSYKYPSKQINELWENVLLCQFHDVLPGSCIEMVY
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) GGGTS
TTTTTTTTS
SS
S

GGG
STTTTTT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence KYEAVPMLHNVVKECTSLIDKTVQFLQSQSKADLVEMRTLGYDDYIVLANGKLKVIICKKTGVITSITDE
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) SSTTTTTTTTGGG
SS
B







STT




SS

TTT
S
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence TLGVEYLDFVIYDDKPLGWQAWDTELYSVNQYKYVTKPKKVQVSCNTKEKCAVEVIFQISEKCKIKSVIS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TT

B






S
SSS



TT





S

S


SS



B

SS




 .........710.........720.........730.........740.........750.........760.........770
Sequence LNATADAKLSKVDISTTVENWDARNKFLKVEFPVNIRNDFASYETQFGITKRPTHYNTSWDVAKFEVCHH
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)




S

S




S

TTS
SS

TT


S



S
 .........780.........790.........800.........810.........820.........830.........840
Sequence KFADYSEYSKGVSILNDCKYGFSTHGNLMRLSLLRSPKAPDAHADMGTHEIKYAIYPHRGALSSDTVKLA
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) S
SSS

SSS


SS
TTTTS

SSSTTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence HEFNYCFKYKLPKDIGMNFDDIISISGDENVILSNIKRGEDEQSIVVRVYESLGGESFASLNTTLNLKRI
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) GGGG



B





S







S


TT





SS
SS






SSS
 .........920.........930.........940
Sequence EKVDNLEMKVYNRIPIKLRPFEIASFRLYF
Predicted secondary structure












SS confidence





























Known secondary structure (DSSP) B
TT

B





S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D