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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5jjqB_

Fold library idPDB HeaderMoleculeTitle
c5jjqB_2.60PDB header: ligaseChain: B: PDB Molecule: amp-dependent synthetase and ligase;


Added to library: Sat Mar 25 16:01:45 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VFTLAQNPVERLHEFLLTGARLTPEKPAVLEGYVSYRQLANRAESYAAALGGLGLDIGDRVVLESDTSAS
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Known secondary structure (DSSP)
TT

STT
TTS

TS


TT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIAALLACSSLGLPFVPVTPETPAKRLLAVVDTVSPALYLQAEGGRREGLPESVGTGRFGPGGLVIERAP
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Known secondary structure (DSSP) T


TT



STT






TTSTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence RPGRGFRREVAPADPAYMVFPKGVVMSHRAILSFYRGMLSQGIVGPESRVASTAPFQFDFSLLDIGLALG
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Known secondary structure (DSSP)



S





TTS



TT



TT

S
TTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGATVVPVPRALLRWPRRFVRFLRDSEATQVNGAPSIWRGALRHEADELAALGGRIRGVLFSGEPFPLPE
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Known secondary structure (DSSP) TT


GGGGG
TT
S

GGGG
TTTTT


SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence VRALQQALPLARIVNCFGSTESVAASFTDVPRPVPDGLTKLSIGHAHPGAEMMLLDDDGVPVTEPGVTGH
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Known secondary structure (DSSP) STT


GGGS



SS

SS

S


B
B
TT

TTS
B

STT

 .........360.........370.........380.........390.........400.........410.........420
Sequence IHLRSGSLFTGYWGDPEATARALVPDPTNPMTGQTVFRTGDLAHRDATGELYFDGRADNQVKIRGNRVEL
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Known secondary structure (DSSP) SS



TT

TTSGGG


TTS
SS
TT
 .........430.........440.........450.........460.........470.........480.......
Sequence TEVERRVAEFTGVAAASAVLLPDPVLAVFVELSPGAEFDEMELGAFCLEELPDYMAPQRIHVLDALP
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Known secondary structure (DSSP) TSTT



TT



TTS
GGGS
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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