PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5ja2A_

Fold library id	PDB Header	Molecule	Title
c5ja2A_	3.00	PDB header: ligase	Chain: A: PDB Molecule: enterobactin synthase component f;

Links to external resources
Added to library: Fri Feb 10 12:19:43 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E K L S E L P S A W S V A H Y V E L T G E V D S P L L A R A V V A G L A Q A D T L R M R F T E V W Q W V D D A L T F E L P E I I D L R T N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S
T T
T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D P H G T A Q A L M Q A D L Q Q D L R V D S G K P L V F H Q L I Q V A D N R W Y W Y Q R Y H H L L V D G F S F P A I T R Q I A N I Y C T W L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S
S
S S S S T T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R G E P T P A S P F T P F A D V V E E Y Q Q Y R E S E A W Q R D A A F W A E Q R R Q L P P P A S L S P A P L P G R S A S A D I L R L K L E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
B
S S S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T D G E F R Q L A T Q L S G V Q R T D L A L A L A A L W L G R L C N R M D Y A A G F I F M R R L G S A A L T A T G P V L N V L P L G I H I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S
T T
S S S
T S
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A Q E T L P E L A T R L A A Q L K K M R R H Q R Y D A E Q I V R D S A A G D E P L F G P V L N I K V F D Y Q L D I P D V Q A Q T H T L A T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B T T T T S
S S
S
S
B T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence P V N D L E L A L F P D V H G D L S I E I L A N K Q R Y D E P T L I Q H A E R L K M L I A Q F A A D P A L L C G D V D I M L P G E Y A Q L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T T
T T
B T T S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence Q L N A T Q V E I P E T T L S A L V A E Q A A K T P D A P A L A D A R Y L F S Y R E M R E Q V V A L A N L L R E R G V K P G D S V A V A L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S S
S S
T T
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence R S V F L T L A L H A I V E A G A A W L P L D T G Y P D D R L K M M L E D A R P S L L I T T D D Q L P R F S D V P N L T S L C Y N A P L T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
T T S
S
T T T T S S S S
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence Q G S A P L Q L S Q P H H T A Y I I F T S G S T G R P K G V M V G Q T A I V N R L L W M Q N H Y P L T G E D V V A Q K T P C S F D V S V W E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S S
S
T T
S
T T S G G G

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence F F W P F I A G A K L V M A E P E A H R D P L A M Q Q F F A E Y G V T T T H F V P S M L A A F V A S L T P Q T A R Q S C A T L K Q V F C S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G G T T
T T
T T
T
S
G G G
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence E A L P A D L C R E W Q Q L T G A P L H N L Y G P T E A A V D V S W Y P A F G E E L A Q V R G S S V P I G Y P V W N T G L R I L D A M M H P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
G G G S S
S T
S S
B
T T
T T S
B

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence V P P G V A G D L Y L T G I Q L A Q G Y L G R P D L T A S R F I A D P F A P G E R M Y R T G D V A R W L D N G A V E Y L G R S D D Q L K I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T T
T T S T T
T T S
S S S T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence G Q R I E L G E I D R V M Q A L P D V E Q A V T H A C V I N Q A A A T G G D A R Q L V G Y L V S Q S G L P L D T S A L Q A Q L R E T L P P H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S T T
S
S
G G G
S S S
S S S S
T T T S
G G

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence M V P V V L L Q L P Q L P L S A N G K L D R K A L P L P E L A P K A G S E T I I A A A F S S L L G C D V Q D A D A D F F A L G G H S L L A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S
S
S S
S S S
S S S S
T T
S
S S S
T T T T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence K L A A Q L S R Q V A R Q V T P G Q V M V A S T V A K L A T I I D R M G F E T I L P L R E G N G P T L F C F H P A S G F A W Q F S V L S R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
S S S
S S
T T S
G G G G G G T T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L D P Q W S I I G I Q S P R P N G P M Q T A A N L D E V C E A H L A T L L E Q Q P H G P Y Y L L G Y S L G G T L A Q G I A A R L R A R E Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S T T
S S T T T T T T T T T T
S S
T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence A F L G L L D T W P P E T L D P E V L A E I N R E R E A F L A A Q Q G E L F T T I E G N Y A D A V R L L T T A H S V P F D G K A T L F V A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T
T T T S
S S
T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . .

Sequence R T L Q E G M S P E R A W S P W E L D I Y R Q D C A H V D I I S P G T F E K I G P I I R A T L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T S T T
S
T T G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	K	L	S	E	L	P	S	A	W	S	V	A	H	Y	V	E	L	T	G	E	V	D	S	P	L	L	A	R	A	V	V	A	G	L	A	Q	A	D	T	L	R	M	R	F	T	E	V	W	Q	W	V	D	D	A	L	T	F	E	L	P	E	I	I	D	L	R	T	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S																																		S	S	S	S												T	T												T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	P	H	G	T	A	Q	A	L	M	Q	A	D	L	Q	Q	D	L	R	V	D	S	G	K	P	L	V	F	H	Q	L	I	Q	V	A	D	N	R	W	Y	W	Y	Q	R	Y	H	H	L	L	V	D	G	F	S	F	P	A	I	T	R	Q	I	A	N	I	Y	C	T	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S				S	S		S	S		S								S	S	S	S										T	T	T			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	E	P	T	P	A	S	P	F	T	P	F	A	D	V	V	E	E	Y	Q	Q	Y	R	E	S	E	A	W	Q	R	D	A	A	F	W	A	E	Q	R	R	Q	L	P	P	P	A	S	L	S	P	A	P	L	P	G	R	S	A	S	A	D	I	L	R	L	K	L	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S																S																S				B			S	S	S	S					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	D	G	E	F	R	Q	L	A	T	Q	L	S	G	V	Q	R	T	D	L	A	L	A	L	A	A	L	W	L	G	R	L	C	N	R	M	D	Y	A	A	G	F	I	F	M	R	R	L	G	S	A	A	L	T	A	T	G	P	V	L	N	V	L	P	L	G	I	H	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										S	S	S	S																		T	T		S										S	S		T					S			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Q	E	T	L	P	E	L	A	T	R	L	A	A	Q	L	K	K	M	R	R	H	Q	R	Y	D	A	E	Q	I	V	R	D	S	A	A	G	D	E	P	L	F	G	P	V	L	N	I	K	V	F	D	Y	Q	L	D	I	P	D	V	Q	A	Q	T	H	T	L	A	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		B																	T	T	T	T	S													S	S		S		S														B	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	V	N	D	L	E	L	A	L	F	P	D	V	H	G	D	L	S	I	E	I	L	A	N	K	Q	R	Y	D	E	P	T	L	I	Q	H	A	E	R	L	K	M	L	I	A	Q	F	A	A	D	P	A	L	L	C	G	D	V	D	I	M	L	P	G	E	Y	A	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S									T	T	S										T	T	T																								T	T		B	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	L	N	A	T	Q	V	E	I	P	E	T	T	L	S	A	L	V	A	E	Q	A	A	K	T	P	D	A	P	A	L	A	D	A	R	Y	L	F	S	Y	R	E	M	R	E	Q	V	V	A	L	A	N	L	L	R	E	R	G	V	K	P	G	D	S	V	A	V	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T								S															S	S	S						S	S																						T	T			T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	S	V	F	L	T	L	A	L	H	A	I	V	E	A	G	A	A	W	L	P	L	D	T	G	Y	P	D	D	R	L	K	M	M	L	E	D	A	R	P	S	L	L	I	T	T	D	D	Q	L	P	R	F	S	D	V	P	N	L	T	S	L	C	Y	N	A	P	L	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S													T	T								T	T	S															S						T	T	T					T	S	S	S	S								S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	G	S	A	P	L	Q	L	S	Q	P	H	H	T	A	Y	I	I	F	T	S	G	S	T	G	R	P	K	G	V	M	V	G	Q	T	A	I	V	N	R	L	L	W	M	Q	N	H	Y	P	L	T	G	E	D	V	V	A	Q	K	T	P	C	S	F	D	V	S	V	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S										S	S	S	S																						S				T	T							S		T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	F	W	P	F	I	A	G	A	K	L	V	M	A	E	P	E	A	H	R	D	P	L	A	M	Q	Q	F	F	A	E	Y	G	V	T	T	T	H	F	V	P	S	M	L	A	A	F	V	A	S	L	T	P	Q	T	A	R	Q	S	C	A	T	L	K	Q	V	F	C	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	G	G	G	G	T	T								T	T		T	T													T																	S										G	G	G								S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	A	L	P	A	D	L	C	R	E	W	Q	Q	L	T	G	A	P	L	H	N	L	Y	G	P	T	E	A	A	V	D	V	S	W	Y	P	A	F	G	E	E	L	A	Q	V	R	G	S	S	V	P	I	G	Y	P	V	W	N	T	G	L	R	I	L	D	A	M	M	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														T											G	G	G	S	S								S						T			S	S					B				T	T								T	T	S		B
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	P	P	G	V	A	G	D	L	Y	L	T	G	I	Q	L	A	Q	G	Y	L	G	R	P	D	L	T	A	S	R	F	I	A	D	P	F	A	P	G	E	R	M	Y	R	T	G	D	V	A	R	W	L	D	N	G	A	V	E	Y	L	G	R	S	D	D	Q	L	K	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										T	T	S					T	T													T	T	S	T	T														T	T	S								S	S	S					T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	Q	R	I	E	L	G	E	I	D	R	V	M	Q	A	L	P	D	V	E	Q	A	V	T	H	A	C	V	I	N	Q	A	A	A	T	G	G	D	A	R	Q	L	V	G	Y	L	V	S	Q	S	G	L	P	L	D	T	S	A	L	Q	A	Q	L	R	E	T	L	P	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													T	T	S	T	T		S									S		G	G	G		S	S	S												S	S	S	S												T	T	T	S		G	G
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	M	V	P	V	V	L	L	Q	L	P	Q	L	P	L	S	A	N	G	K	L	D	R	K	A	L	P	L	P	E	L	A	P	K	A	G	S	E	T	I	I	A	A	A	F	S	S	L	L	G	C	D	V	Q	D	A	D	A	D	F	F	A	L	G	G	H	S	L	L	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S		S						S	S					S	S	S				S	S	S	S										T	T														S				S	S	S			T	T	T	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	K	L	A	A	Q	L	S	R	Q	V	A	R	Q	V	T	P	G	Q	V	M	V	A	S	T	V	A	K	L	A	T	I	I	D	R	M	G	F	E	T	I	L	P	L	R	E	G	N	G	P	T	L	F	C	F	H	P	A	S	G	F	A	W	Q	F	S	V	L	S	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S												S													S	S	S								S	S									T	T	S			G	G	G	G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	D	P	Q	W	S	I	I	G	I	Q	S	P	R	P	N	G	P	M	Q	T	A	A	N	L	D	E	V	C	E	A	H	L	A	T	L	L	E	Q	Q	P	H	G	P	Y	Y	L	L	G	Y	S	L	G	G	T	L	A	Q	G	I	A	A	R	L	R	A	R	E	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T										S	T	T							S	S	T	T	T	T	T	T	T						T	T	T			S	S								T															T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	A	F	L	G	L	L	D	T	W	P	P	E	T	L	D	P	E	V	L	A	E	I	N	R	E	R	E	A	F	L	A	A	Q	Q	G	E	L	F	T	T	I	E	G	N	Y	A	D	A	V	R	L	L	T	T	A	H	S	V	P	F	D	G	K	A	T	L	F	V	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S				T	T																				T						T	T														T	S							S	S								T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.
Sequence	R	T	L	Q	E	G	M	S	P	E	R	A	W	S	P	W	E	L	D	I	Y	R	Q	D	C	A	H	V	D	I	I	S	P	G	T	F	E	K	I	G	P	I	I	R	A	T	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S				T	T	T					S	T	T									S			T	T	G	G	G	S