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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j98B_

Fold library idPDB HeaderMoleculeTitle
c5j98B_2.60PDB header: virusChain: B: PDB Molecule: vp2;


Added to library: Sat Jun 11 08:18:49 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDRPEGSEERTVQTSNVVLGETNIESQDIASKEYSPTWDRLASSEVSDEYPMLTDRWLFWKSVKWEVNDS
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Known secondary structure (DSSP)

SSS



TT
S

SS





GGGGT
SS

B

SS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AFGKMLVQEKFPQSWVQMDVNVNNIPRYTNIPNFIPFNIHQYMRADFEVKIYVNPNDFVSGWLIMAFLYQ
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Known secondary structure (DSSP)
TT
T

B
TTS
B
SSS
TTT




TT
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GSEMFDYKLRRNPAALMQMPHVLVNVGAANEATLKIPYRYVRPFMRCKDILRGDNLITGVTEPLNMGVLF
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Known secondary structure (DSSP) GGGSTTGGGGGSTTSSTTTT





SSSSSSS




SS





TT
 .........220.........230.........240.........250.........260
Sequence VEVLIPFRTSAASSAPKSLDVSLFVKMTNAKFTGMVDGSIALLSKPIALP
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Known secondary structure (DSSP)

SSTTS

SS


TTSS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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