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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j96C_

Fold library idPDB HeaderMoleculeTitle
c5j96C_3.41PDB header: virusChain: C: PDB Molecule: genome polyprotein;


Added to library: Sat Jun 11 08:19:19 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DNPPDPTPAKFFVPIPSHSWAHGTNTSEPTNTLRLDGGVVGVGRSDDIGTSDTAISGIIGVYGLLKPFDW
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SSS
SS

SSS






SS

SS





TTS





TTS



B

 .........80.........90.........100.........110.........120.........130.........140
Sequence NANDTGRNVGGHLLWSMPVHPQVDKDQVIQVMTQSKLTQYYLPPISVVSSLYAYTRGSIKYKFLFGNNPR
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Known secondary structure (DSSP) BSS
TTTSSTT
SSS

GGGS


TTS




TTBSS



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HNARLLVAYIPGISSDNRLTLERARNSAHVVFSLNEVSEFVFTVPYITDTMWWPRKYGGPQAAGEFVAPS
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T

SSTT

TTS
SS





SSSS
SS

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S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YICMFILNPLVAMESVPSIVTIVPMIAAGDDFEVAVPAQPAVGLSRNIDVIYPKDSIISFKSGYFPVYVG
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TTS
SB


TT


B


S


SS





SS




S
TTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SWHSFFDSTKAILRYGAVSDHIAQLGNIPANVNRKAFWIVVGDTIKFKTLDKINGTEWFIPEGEYTLGYG
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TTTGGGTB
S
SSTT
B






TTS
TT


S







TTS




SS
 .........360.........370.........380.........390.........400.........410.
Sequence VVWRDGAYAYMVPYPLTPLGEKIAQYTASLLASNTAISQIRPIPDYIVDSAASKDNILWSP
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Known secondary structure (DSSP) TTSSTT

TTTS



B

S




SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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