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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j8jA_

Fold library idPDB HeaderMoleculeTitle
c5j8jA_2.72PDB header: hydrolaseChain: A: PDB Molecule: histone deacetylase hda1;


Added to library: Sat Apr 22 08:19:21 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHHHGSMLQKAIRQQQQHYLSDEFNFVTLPLVSMDLPDNTVLCTPNISESNTIIIVVHDTSDIWAKRNVI
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Known secondary structure (DSSP)








TTSSS
GGG
TTGGG
SS



B
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGTIDLSSSVIIDNSLDFIKWGLDRKYGIIDVNIPLTLFEPDNYSGMITSQEVLIYLWDNYIKYFPSVAK
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Known secondary structure (DSSP) T

B
GGG

TTTTT




SSSS
TTTT
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence IAFIGIGDSYSGIVHLLGHRDTRAVTKTVINFLGDKQLKPLVPLVDETLSEWYFKNSLIFSNNSHQCWKK
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Known secondary structure (DSSP) GGGS

TTTTS






SS
TT
TT
SS


 .........220.........230.........240....
Sequence PRKKFGRVLRCDTDGLNNIIEERFEEATDFILDS
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Known secondary structure (DSSP)

GGG


SS
ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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