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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j72B_

Fold library idPDB HeaderMoleculeTitle
c5j72B_1.70PDB header: hydrolaseChain: B: PDB Molecule: putative n-acetylmuramoyl-l-alanine amidase,autolysin cwp6;


Added to library: Sat Feb 11 11:23:27 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDININLQRKSVVLGSKSNASVKFKEKLNADSITLNFMCYDMPLEATLNYNEKTDSYEGVINYNKDPEYL
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S
S
TT
SS

S
STTTTTT




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NVWELQSIKINGKDEQKVLNKEDLESMGLNLKDYDVTQEFIISDANSTKAVNEYMRKTSAPVKKLAGATR
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SS

TT

GGGG



GGGSS


TTTTT




SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FETAVEISKQGWKDGSSKVVIVNGELAADGITATPLASTYDAPILLANKDDIPESTKAELKRLNPSDVII
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Known secondary structure (DSSP)
TT

SSTTGGGGTTT


SS




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IGDDGSVSQKAVSQIKSAVNVNVTRIGGVDRHETSLLIAKEIDKYHDVNKIYIANGYAGEYDALNISSKA
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Known secondary structure (DSSP) S
TTTS
S



SSS


TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GEDQQPIILANKDSVPQGTYNWLSSQGLEEAYYIGGSQSLSSKIIDQISKIAKNGTSKNRVSGADRHETN
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Known secondary structure (DSSP) T


SS


TT
S
TTTS
TT
SGGG

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ANVIKTFYPDKELSAMLVAKSDIIVDSITAGPLAAKLKAPILITPKTYVSAYHSTNLSEKTAETVYQIGD
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Known secondary structure (DSSP)


STT
ST


TT


GGG
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GMKDSVINSIASSLSKHNAPTEPDNSGSAAGKTVVIDPGHGGSDSGATSGLNGGAQEKKYTLNTALATTE
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Known secondary structure (DSSP)
S
TTSTT

S
GGG
S
TTS


BTTB

SSTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YLRSKGINVVMTRDTDKTMALGERTALSNTIKPDLFTSIHYNASNGSGNGVEIYYKVKDKNGGTTKTAAS
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Known secondary structure (DSSP) TT
S
SSS





S
SSS





GGGTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence NILKRILEKFNMKNRGIKTRTLDNGKDYLYVLRNNNYPAILVECAFIDNKSDMDKLNTAEKVKTMGTQIG
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Known secondary structure (DSSP)





B
TTSSBSST
SS
TT
TT
S
 ........
Sequence IGIEDTVK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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