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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j67C_

Fold library idPDB HeaderMoleculeTitle
c5j67C_3.16PDB header: membrane proteinChain: C: PDB Molecule: astrotactin-2;


Added to library: Sat May 28 08:22:28 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQ
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Known secondary structure (DSSP)




TT
STTT
B
SSS

S

S

B



SS
B

SSS

B
TT

TTTTT



GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLAAGFTNVLKILTKESSREELLSFIQHYGSHYIAE
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Known secondary structure (DSSP) GGSS


TTT
S

S




B




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALYGSELTCIIHFPSKKVQQQLWLQYQKETTSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPST
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Known secondary structure (DSSP)
S




TTTS
SSTTTT
S

BSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDA
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Known secondary structure (DSSP)
SSS

TTT
BSS


GGGGS
SSTTSTT
TT


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGLPNCSPLLQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFAD
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Known secondary structure (DSSP) TS


SS







SS



SS




SSS


SSSSSTT





 .........360.........370.........380.........390.........400.........410.........420
Sequence DLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDN
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Known secondary structure (DSSP)

TTS

TTT
SSSS

S

TT
TT

B









 .........430.........440.........450.........460.........470.........480.........490
Sequence KAEEIADKIYNLYNGYTSGKEQQMAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLI
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Known secondary structure (DSSP)
S
S
GGG


 .........500.........510.........520.........530.........540.........550.........560
Sequence LRRLERVSSHCSSLLRSAYIQSRVETVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGES
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Known secondary structure (DSSP) TS
TT


SS




SS



GGGS

SS
 ...
Sequence KGR
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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