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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j5pB_

Fold library idPDB HeaderMoleculeTitle
c5j5pB_1.97PDB header: isomerase/dnaChain: B: PDB Molecule: dna topoisomerase 4 subunit b;


Added to library: Sat Jul 29 08:26:38 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSL
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Known secondary structure (DSSP)

BTTB
SGGG





S
SSTT

S
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TVQDHGRGMPTGMHAMGIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAV
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Known secondary structure (DSSP)
SS



SB
TTSSB
TT
SS
SSSSS
SS
S

SS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YKQRFENGGKPVTTLKKIGTAPKSKTGTKVTFMPDATIFSTTDFKYNTISERLNESAFLLKNVTLSLTDK
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Known secondary structure (DSSP) TTTSS



TT


TTT
S




TSTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence RTDEAIEFHYENGVQDFVSYLNEDKEILTPVLYFEGEDNGFQVEVALQYNDGFSDNILSFVNNVRTKDGG
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Known secondary structure (DSSP) TTT

SSTTTS
BSS

TTBSS


TT
TT
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence THETGLKSAITKVMNDYARKTGLLKEKDKNLEGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSPLARP
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Known secondary structure (DSSP) TTSS
TTS



TT

GGG

BSTTTT
SB

TT
 .........360.........370.........380.........390......
Sequence VVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESR
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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