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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j3nA_

Fold library idPDB HeaderMoleculeTitle
c5j3nA_2.45PDB header: hydrolaseChain: A: PDB Molecule: green fluorescent protein,hsdr;


Added to library: Sat Apr 15 08:43:58 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFVQCFS
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Known secondary structure (DSSP)


TGGGGGSSTTTTTTTTSS
SS
GGGGTTT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence RYPDHMKRHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKDDGNILGHKLE
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Known secondary structure (DSSP) B

GGGGGG
TTTT
TTS
TTS

TTSTTTTT
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence YNYNEHLVYIMADKQKNGTKAIFQVHHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLHTQSALSKDPN
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Known secondary structure (DSSP) S



TTTTBTTS
SS
S





S

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EKRDHMVLLEFVTAAGITHGMDELYKEFEINLDYILGLIFEHNRGEMIEEVKRLIRSSLGNRAKEGLVVD
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Known secondary structure (DSSP)

SS



S
SS






SSS
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence FIQQTNLDDLPDKASIIDAFFTFAQREQQREAEALIKEENLNEDAAKRYIRTSLKREYATENGTELNETL
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Known secondary structure (DSSP) TS
TTTS
STT

TS

SSTTTTGGG
 .........360.........370.........380.....
Sequence PKLSPLNPQYKTKKQAVFQKIVSFIEKFKGVGGKI
Predicted secondary structure




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Known secondary structure (DSSP)
S

SS

SSS
TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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