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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5j23D_

Fold library idPDB HeaderMoleculeTitle
c5j23D_2.30PDB header: oxidoreductaseChain: D: PDB Molecule: 2-hydroxyacid dehydrogenase;


Added to library: Sat Apr 16 08:26:29 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPRILVPGKINPRVLERLPEMFETVRIERADAALVTADMRDVSGIAVSGKLPVPLMDAFPSLEIVANFGV
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Known secondary structure (DSSP)

S


GGGT
SSS
GGG

GGGTT

SS
B
TT
TT

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GYDGVDVSRAAARGIVVTNTPDVLTEEVADTAIGLLLNTLRLLPQAEQWLRQGRWVREGAFPLSPLSLRG
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Known secondary structure (DSSP)

TTB
TT



STT
TT
S



S

STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTVGLFGLGRIGLAIARRLEAFGVSIAYHTRTPREGLGFTYHPTLVGMAEAVDTLIVIVPGTASTLKAVN
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Known secondary structure (DSSP)


STTT

SS

TT

S
SS
S




STTTT
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADVLSALGPKGVLINVGRGSTVDEAALVTALQNGTIAGAGLDVFENEPNVPEALLSFPNVSLLPHVASAS
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Known secondary structure (DSSP)
TT

S
GGGB
TSSSS

TTTT



TT
SS
TT
S
 .........290.........300.........310........
Sequence VVTRNAMSDLVVDNLKAWFSTGEALTPVAETPFRRRAI
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Known secondary structure (DSSP) S

SSB
TT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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