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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5izdE_

Fold library idPDB HeaderMoleculeTitle
c5izdE_2.05PDB header: oxidoreductaseChain: E: PDB Molecule: d-glyceraldehyde dehydrogenase (nadp(+));


Added to library: Sat Apr 15 09:14:03 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDTKLYIDGQWVNSSSGKTVDKYSPVTGQVIGRFEAATRDDVDRAIDAAEDAFWAWNDLGSVERSKIIYR
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Known secondary structure (DSSP)

TT

TT


TTT
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence AKELIEKNRAELENIIMEENGKPVKEAKEEVDGVIDQIQYYAEWARKLNGEVVEGTSSHRKIFQYKVPYG
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Known secondary structure (DSSP) T


TTTT




SSTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IVVALTPWNFPAGMVARKLAPALLTGNTVVLKPSSDTPGSAEWIVRKFVEAGVPKGVLNFITGRGSEIGD
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Known secondary structure (DSSP)

SSSTTTT


TT
TT

TTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence YIVEHKKVNLITMTGSTATGQRIMQKASANMAKLILELGGKAPFMVWKDADMDNALKTLLWAKYWNAGQS
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Known secondary structure (DSSP)
TT

S
GGGTT





TT

GGGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence IAAERLYVHEDIYDTFMSRFVELSRKLALGDPKNADMGPLINKGALQATSEIVEEAKESGAKILFGGSQP
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Known secondary structure (DSSP)

TTTTT

BS
TTT
SB


SSTT


S

 .........360.........370.........380.........390.........400.........410.........420
Sequence SLSGPYRNGYFFLPTIIGNADQKSKIFQEEIFAPVIGARKISSVEEMYDLANDSKYGLASYLFTKDPNII
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Known secondary structure (DSSP)


GGGGGS




S

TTSS


SS


SS

S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence FEASERIRFGELYVNMPGPEASQGYHTGFRMTGQAGEGSKYGISEYLKLKNIYVDYSGKPLHINTVRDDL
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Known secondary structure (DSSP) S
SSSS




TTS
B

SGGGS
BSGGG


S



TTS
GGG
 .
Sequence F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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