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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5iy3A_

Fold library idPDB HeaderMoleculeTitle
c5iy3A_2.20PDB header: viral proteinChain: A: PDB Molecule: genome polyprotein;


Added to library: Sat Apr 16 08:17:37 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLECDPAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESDLIIPK
Predicted secondary structure






























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Known secondary structure (DSSP)

B

GGG
TT
SSSSSSS


SB

GGG
S

SS

GGG
SS
G
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCCRE
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Known secondary structure (DSSP) GGT


SGGG

TT



TTS
TT
SSS

TT

TTS



S
BBSB
SS

B

SS
 .........150.........160.........170.......
Sequence CTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA
Predicted secondary structure















SS confidence




































Known secondary structure (DSSP)

SS
TT
TT
SSS
GGGS
B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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