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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ixmG_

Fold library idPDB HeaderMoleculeTitle
c5ixmG_2.75PDB header: transport proteinChain: G: PDB Molecule: lps-assembly protein lptd;


Added to library: Sat May 21 08:48:38 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGFLIPNAKFTSNNGFEFLLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPNDR
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Known secondary structure (DSSP)

B


TTT

TTTTTTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IYTGPDGTDKNATRWLYYWGHSGVMDQVWRFNINYTRVSDPAYFTDLTSQYGSTTDGYATQIFTAGYANE
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Known secondary structure (DSSP) S

TTTT

SS

TTTSSTTS

TT

TT
S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NWNATLSSKQFQVFTAAGNSNAYRAQPQLDMNYYKNDVGPFDMHVYGQAAKFTSVNPTNPEASRFHIEPT
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Known secondary structure (DSSP) SSS

TT
S
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VNLPLSNSWGSINTEAKLLATHYQQDIPASFADNASNPKLKDSVNRVLPQFKVDGKVVFDRSMDWATGFT
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Known secondary structure (DSSP)
SS


TTTTT
TTS



S


SSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QTLEPRAQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTGLTSRIYDDARVERF
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Known secondary structure (DSSP)




TTS

SS

B



TGGGG
S
SBSSSS




TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence NVSVGQIYYFSRSRTGNTNATGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAIMEYRKDADRMI
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Known secondary structure (DSSP) SS


SS





SSSGGG
SSSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QLNYRYASPKYIQAAVPKVYNPDYQQGISQVGTTASWPIADRWAIVGAYYYDTKAKQPASQLVGLQYNTC
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Known secondary structure (DSSP)
S
S


TTT


TTTTTTTT
 .........500.........510.........520.........530.........
Sequence CWAVNLGYERKITGWNAQGQTSKYDNKIGFNIETAQMLNSGILPYQSAF
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Known secondary structure (DSSP) T
STT





TTTSSSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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